Query= MSMg01no332_c22.b1 MSMg01no332_c22.b1 CHROMAT_FILE:
MSMg01no332_c22.b1 PHD_FILE: MSMg01no332_c22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:18:22 2005
(474 letters)
>mm_chr12_95726081_95726954
Length = 874
Score = 893 bits (462), Expect = 0.0
Identities = 471/474 (99%)
Strand = Plus / Plus
Query: 1 tttgggtgtggacgggagaggaaatactatgttacaagtatttgtaatatgtctttgtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgggtgtggacgggagaggaaatactatgttacaagtatttgtaatatgtctttgtag 260
Query: 61 gcagcatatctgaaaagattcatatgcatttttggattcactgagtagaaatcaatccca 120
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 261 gcagcatatctgaaaagattcatatgcatttttggatgcactgggtagaaatcaatccca 320
Query: 121 gacatacactgatcatccaagacatgccaggaggggtgttttgtgctattgagaacagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacatacactgatcatccaagacatgccaggaggggtgttttgtgctattgagaacagat 380
Query: 181 gttaaagatacttatttcaaatgtaaagacagacacttctatttctattgtgtggtgtgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttaaagatacttatttcaaatgtaaagacagacacttctatttctattgtgtggtgtgg 440
Query: 241 accaagataacatttatagtaactgttcctggacatattatgtccccacactatcacaag 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 441 accaagataacatttatagtaactgttcctggacatattatgtccccatactatcacaag 500
Query: 301 ttactctgtcagtgattctcaaagttttcttgtatgatcactggcagaaacaattgaggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttactctgtcagtgattctcaaagttttcttgtatgatcactggcagaaacaattgaggg 560
Query: 361 taaatttgagtctatcacatacctggatgaaaaggctgctatcacttttgtgaaaataaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taaatttgagtctatcacatacctggatgaaaaggctgctatcacttttgtgaaaataaa 620
Query: 421 tctgaactgtaaaacatataagaaactataagctgaaatctaccaaatgcctag 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctgaactgtaaaacatataagaaactataagctgaaatctaccaaatgcctag 674
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 874
Length adjustment: 10
Effective length of query: 464
Effective length of database: 864
Effective search space: 400896
Effective search space used: 400896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no332_c22.g1 MSMg01no332_c22.g1 CHROMAT_FILE:
MSMg01no332_c22.g1 PHD_FILE: MSMg01no332_c22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:18:22 2005
(720 letters)
>mm_chr12_95869070_95870189
Length = 1120
Score = 1058 bits (547), Expect = 0.0
Identities = 604/629 (96%), Gaps = 10/629 (1%)
Strand = Plus / Minus
Query: 1 ttttagggattagaatacaaaaacattatttttcacatatttcttgatcagtgttttatt 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ttttagggattagaaaacaaaaacattatttttcacatatttcttgatcagtgttttatt 560
Query: 61 atttcaaatgccattatagtattctaacaaatgacctgtcccactatttctgtgtacttt 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 acttcaaatgccattatagtattctaacaaatgacctgtcccactatttctgtgtacttt 500
Query: 121 aagaactctgtgagaaaagagatttgatttcaacctttaaggaactcagacaattacttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 aagaactctgtgagaaaagagatttgatttcaacctttaaggaactcagacaattacttg 440
Query: 181 ggctaaataggttaccctttcatcatccacaagcacttctctagtctctgaagttgaaac 240
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 439 tgctaaataggttaccctttcatcatccacaagcacttctccagtctctgaagttgaaac 380
Query: 241 ttcattctggaattatcatccattttaagaaattgttttttagtacttgtagagtagtat 300
|||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 379 ttcattctggaattctcatccattttaagaaattgtctggcagtacttgtagagtagtat 320
Query: 301 tgcccacagtaagttaacttctttcacataatattacattatttaagctttatttctgaa 360
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 319 tgcccacagtaagttaacttctttcacataatattacattatttaacctttatttctgaa 260
Query: 361 gtatttgtgtttcaggatattgatttcccacactttaattccacattacacttttttttt 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gtatttgtgtttcaggatattgatttcccacactttaattccacattacactttttttt- 201
Query: 421 ttattttttaactatcatgccatttcgatctgagttgtgctttctgatgataaaatctgg 480
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ---------aactatcatgccatttcgatctgagttgtgctttctgatgataaaatctgg 150
Query: 481 cattcaaatgctatctgccttggttgtctcatctgaccatatctgccctggtcctcttgc 540
|||||||||| |||||||||||||| ||||||||||||||||||||| |||| |||||||
Sbjct: 149 cattcaaatgatatctgccttggttctctcatctgaccatatctgccttggttctcttgc 90
Query: 541 tgttttaaagggaatccccgactgtctatgtttaatcaatttgtttatgatgtggtgagc 600
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 89 tgttttaaagggaatccccgattgtctatgtttaatcaatttgtttatgatgtggtgagc 30
Query: 601 attttatttaaaacattgattaaatattc 629
|||||||||||||||||||||||||||||
Sbjct: 29 attttatttaaaacattgattaaatattc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 720
Length of database: 1120
Length adjustment: 10
Effective length of query: 710
Effective length of database: 1110
Effective search space: 788100
Effective search space used: 788100
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
|
