Query= MSMg01no334_o20.b1 MSMg01no334_o20.b1 CHROMAT_FILE:
MSMg01no334_o20.b1 PHD_FILE: MSMg01no334_o20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:31 2005
(595 letters)
>mm_chr12_53740542_53741537
Length = 996
Score = 1050 bits (543), Expect = 0.0
Identities = 558/563 (99%), Gaps = 1/563 (0%)
Strand = Plus / Minus
Query: 34 cacctgctaaagaaaaccctcattacattggctctgtttattgtgagggagtcatgcatg 93
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 996 cacctgctaaagaaaaccatcattacattggctctgtttattgtgagggagtcatgcatg 937
Query: 94 gcacagctcccctgtagaggtcagagggctcccctgtggaagccagttctcagcttctac 153
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 936 gcacagctcccctgtagaggtcagagggctcccctatggaagccagttctcagcttctac 877
Query: 154 catttggtttcgaaggtgaaacttaggtcgccagacttggaggcgagtgcttttacctgc 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 catttggtttcgaaggtgaaacttaggtcgccagacttggaggcgagtgcttttacctgc 817
Query: 214 tgagccttctccccagcccctgcctggtcacctttatcaagagaggatttagagcaaatt 273
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 816 tgagccttctccccagcccctgcctggtcacctttagcaagagaggatttagagcaaatt 757
Query: 274 aattctatcagctctaccactggggtgagatgggtaggaaaatacccatctttatcaaaa 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 aattctatcagctctaccactggggtgagatgggtaggaaaatacccatctttatcaaaa 697
Query: 334 ttttggctacaaggcaacccctgcaaacttttgtttctgttgaattttttttcttcactt 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 ttttggctacaaggcaacccctgcaaacttttgtttctgttgaattttttttcttcactt 637
Query: 394 taatgcctttctttgaaaatatttaaaagtctaaaatatttcccagatgatacagatctg 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 taatgcctttctttgaaaatatttaaaagtctaaaatatttcccagatgatacagatctg 577
Query: 454 ctgagttctcagctaagttgcaaaagcttaatgagatcacttcttgaacataattgtaac 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 ctgagttctcagctaagttgcaaaagcttaatgagatcacttcttgaacataattgtaac 517
Query: 514 agtgtgtcccatgtacgtaaatcgggg-tccttctttaccttcttcatgtggccttgagg 572
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 516 agtgtgtcccatgtatgtaaatcgggggtccttctttaccttcttcatgtggccttgagg 457
Query: 573 gtacaacttctgtgtgtgtccat 595
|||||||||||||||||||||||
Sbjct: 456 gtacaacttctgtgtgtgtccat 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 996
Length adjustment: 10
Effective length of query: 585
Effective length of database: 986
Effective search space: 576810
Effective search space used: 576810
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no334_o20.g1 MSMg01no334_o20.g1 CHROMAT_FILE:
MSMg01no334_o20.g1 PHD_FILE: MSMg01no334_o20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:31 2005
(656 letters)
>mm_chr12_53578735_53579790
Length = 1056
Score = 1253 bits (648), Expect = 0.0
Identities = 654/656 (99%)
Strand = Plus / Plus
Query: 1 tcagatgctattaaagattagtagagagtattttaaaaattgtactcttgacctaaaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcagatgctattaaagattagtagagagtattttaaaaattgtactcttgacctaaaaag 260
Query: 61 taatcctttcattttaacttttgagcttctcttataagtacacagactgtaacagtattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taatcctttcattttaacttttgagcttctcttataagtacacagactgtaacagtattc 320
Query: 121 tgttgtttagcagaagccatgttatatctctcagatgccgtgaaatcataaaccgaagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgttgtttagcagaagccatgttatatctctcagatgccgtgaaatcataaaccgaagaa 380
Query: 181 atcaaagtcaatttatgagccttccaaatcttgtgaaggaaatagcaagggaatgcttag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcaaagtcaatttatgagccttccaaatcttgtgaaggaaatagcaagggaatgcttag 440
Query: 241 aaaaagtatatttatctctatgaaatatgaaaaataatttcaatgtgcttccctaagtga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaaagtatatttatctctatgaaatatgaaaaataatttcaatgtgcttccctaagtga 500
Query: 301 gtctgtatgccgtctatgctgtggaagattatgactgcatcgagttgactttatacggtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtctgtatgccgtctatgctgtggaagattatgactgcatcgagttgactttatacggtg 560
Query: 361 ctttggggaactggcataattgaaagatctgaagataaaaactagcatcaattgtgccga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctttggggaactggcataattgaaagatctgaagataaaaactagcatcaattgtgccga 620
Query: 421 aaagttccttttaaataagatctgttaaattacactgcaaagtatggaggaaatatttca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaagttccttttaaataagatctgttaaattacactgcaaagtatggaggaaatatttca 680
Query: 481 tcctatctaaatgtggaatccgtgactccctgaacattatggtaagttgtgtagtacagg 540
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttctatctaaatgtggaatccgtgactccctgaacattatggtaagttgtgtagtacagg 740
Query: 541 tcagcttggttcttagctgggtgagttgcttccttagtttctgatgattctgattttcca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcagcttggttcttagctgggtgagttgcttccttagtttctgatgattctgattttcca 800
Query: 601 catagtcctatgtcttttcctcatctccttcctcaaccacagtctctagtcagatt 656
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 801 catagtcctatgtcttttcctcatctccttcctcaaccacagtctctcgtcagatt 856
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
