Query= MSMg01no337_i04.b1 MSMg01no337_i04.b1 CHROMAT_FILE:
MSMg01no337_i04.b1 PHD_FILE: MSMg01no337_i04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:55 2005
(571 letters)
>mm_chr12_84788200_84789170
Length = 971
Score = 953 bits (493), Expect = 0.0
Identities = 534/549 (97%), Gaps = 3/549 (0%)
Strand = Plus / Minus
Query: 23 gaaaaggaacctgtgagctacttatggggaagagccagttaatgcagtatgtgttaagag 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 956 gaaaaggaacctgtgagctacttatggggaagagccagttaatgcagtatgtgttaagag 897
Query: 83 acaaggggtttggcctggcaccatcgtcaacacttggatgaggatcagaagaagttttag 142
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |
Sbjct: 896 acaaggggtttggcctggcaccatcgtcaacacttggatgaggatc---agaagttctgg 840
Query: 143 gtcacccttgactacatagctgaggtggaagttagtctgggttacatgcaaccttgtctc 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839 gtcacccttgactacatagctgaggtggaagttagtctgggttacatgcaaccttgtctc 780
Query: 203 caaagaaaggtctagtttggaggccacgccaattggaattaaaatgaatcaatggtagcc 262
|||||||||||||| |||||||| || |||||| ||||||||||||||||||||||||||
Sbjct: 779 caaagaaaggtctattttggaggtcatgccaatcggaattaaaatgaatcaatggtagcc 720
Query: 263 tcagttgtactgtgaccgtataagacaagactgcatgtccaagccagctaagcacattgg 322
||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 719 tcagttgtattgtgaccgtagaagacaagactgcatgtccaagccagctaagcacattgg 660
Query: 323 agtcctctttcaaggctttggatggcaccagggtgcaaggagcgtgagagcacccaaggc 382
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 659 agtcctctttcaaggctttggatggcaccagggtgcaaggagcgttagagcacccaaggc 600
Query: 383 tgagctgaccttccaatagggtggccagagagcagcctttacttcttggtgtttggatta 442
|||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 599 tgagctgaccttccaatagggtagccagagagcagcctttacttcttggtgtttagatta 540
Query: 443 actgtctggcacctgatcctcagagagcctttccagcatttcagggcttgctgtccagag 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 actgtctggcacctgatcctcagagagcctttccagcatttcagggcttgctgtccagag 480
Query: 503 accgttcttcctctctatggtattcctggctacttggaaaatctgaagatctggcaatct 562
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 accgttcttcctttctatggtattcctggctacttggaaaatctgaagatctggcaatct 420
Query: 563 ggatcttca 571
|||||||||
Sbjct: 419 ggatcttca 411
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space: 539121
Effective search space used: 539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no337_i04.g1 MSMg01no337_i04.g1 CHROMAT_FILE:
MSMg01no337_i04.g1 PHD_FILE: MSMg01no337_i04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:55 2005
(413 letters)
>mm_chr12_84681168_84681974
Length = 807
Score = 714 bits (369), Expect = 0.0
Identities = 400/421 (95%), Gaps = 18/421 (4%)
Strand = Plus / Plus
Query: 1 tgggaaatagagggcaagagattcaagggagt------------cgctgaggaagaaaca 48
|||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 189 tgggaaatagagggcaagagattcaagggagtcgctgaggaagacgctgaggaagaaaca 248
Query: 49 gaccaggcctgaaggaagggtaactaaccaggaggtagatgaactcaagatagaataaaa 108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gaccaggcctgaaggaagggtaactaaccaggaggtagatgaactcaagatagaataaaa 308
Query: 109 gggataatgaataggtcagaaaacaagccaacgcttaaggcccaggcaattattaataaa 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gggataatgaataggtcagaaaacaagccaacgcttaaggcccaggcaattattaataaa 368
Query: 169 taattagtctcagagtcatcgtttccaggagcaggagctgggaggaaattttggaattat 228
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 taattagtctcagagtcaccgtttccaggagcaggagctgggaggaaattttggaattat 428
Query: 229 tttttagacaagagggttgccggctgccagcctagctccaggtccagtgagaaacagacc 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tttttagacaagagggttgccggctgccagcctagctccaggtccagtgagaaacagacc 488
Query: 289 ctgccaaaaaggaataaaacagaatattggatgtcctcctctggcatgtgcgtacaccta 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ctgccaaaaaggaataaaacagaatattggatgtcctcctctggcatgtgcgtacaccta 548
Query: 349 tgctcatgtaaaacacatacatatacttctctgaaagagtcagataaataggcagacaga 408
|||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||
Sbjct: 549 tgctcatgtaaaacacatacat------ctctgaaagagtcagataaatagacaggcaga 602
Query: 409 c 409
|
Sbjct: 603 c 603
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 807
Length adjustment: 9
Effective length of query: 404
Effective length of database: 798
Effective search space: 322392
Effective search space used: 322392
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
