NCTCTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTCCCTGTTTCCTCCAAGCCTGGTTCTAGGAAGCTAAAAATATTT
CCTAGGATTGGTGAAATGCTTGGTCAGGGATACATTAATTGTGGGGCTGC
CTCTAGTCCCCAGAGAGACCTATCCACTGCTACGCAACAGGATCCAGCAG
GAGGAGAACGGTGTAAATGGCTGTCTGGTGACCAGATGGACAGGGCAAGG
ACTTCAGGAAGGAGTAGCCATTGTTTGAAAGAACACTGCTCCCTTGAGCA
GAAGAGTTCTGAATCCAGCCTCCATGCTTCAAGCTCCCTGCTCTCCCCGT
ACACTGCGACCTCTCTAAAAAAGCCACAGGACATTTGCTTTGCATTGAGG
TGAAGCAGAACAATTTGGAGCAGACTCAGCCCCAGCTACAGAGAAGCCTC
TGACGCAATCCGTGGTAGGTAAAATTTAGCAGGGACACCACCTACCCTCA
TACCCCTGCATATGCTGTGCCCCACGAGGAGCCTTCCTGCCAGGAACCCC
AGCACAGTGTGTTCCCTGGGCCAGCTGAAGGTGTGGCCTTCATTCCTTTT
GCATGGCATGAATGAGCAGGGCCCAGACATTGCTAGTTAACATCTGCAAT
TACTCTGATATAAGTAGATGCCAGAAACCTCCACCTTCACATCTCCATGG
ACCAGAGGTGCTAGTAAAGTGTGACCAACCCGAATGCCCCAAAGGGGACA
A

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXTTGTCCTCTGCAAGATAGCAACAAACACTCCTAACCACTGGGCC
ATCTCCCCTGCCCCAGGAGTCAGTTCTTTGAAAGGACAAACAGGATTGAC
AACTTTTAGCCAAACTCANAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAA
GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA
AAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAAGAA
AAGAAAAAGAGAAGACCAGGGCTGGAGAGATGGCTCAGTATTTAAGAGCA
CTGGCTGCTCTTCCAGAGGGCCCAGGTTCAATCCCAACACCCACATGGCA
GCTCATAACTATCTGTAACTCCAGTTCCAGGGGATCTGATACCCTCACAC
AGACACACATGCAGGCAAAACACCAATGAAAATAAATAAATCATTAAAAA
GGAAGGAAGGAAAGAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA
TAGAAAGACAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAC
GAAAGAAAGAAAGATAGAAAGAAAGAAAGAAAGGCCGTGGTGGCACACGC
CTTTAATCCCAGAACTCGCGGAGCAAAAAGAAGGCGGGATTTCTGAAGTC
AAGGCCAGCCTGGGCCAATAAAAGGAAGTTCCAGTAAAGCCCGGAATAAA
CCCAAAAAA

Query= MSMg01no339_b16.b1 MSMg01no339_b16.b1 CHROMAT_FILE:
MSMg01no339_b16.b1 PHD_FILE: MSMg01no339_b16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:52 2005
         (564 letters)



>mm_chr12_81635205_81636168
          Length = 964

 Score =  994 bits (514), Expect = 0.0
 Identities = 549/562 (97%), Gaps = 4/562 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctccctg--tttcctccaagcctggttctaggaagctaaaaatatttcctaggat 62
           ||||||||||||  ||  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctccctgaatt--ctccaagcctggttctaggaagctaaaaatatttcctaggat 262

                                                                       
Query: 63  tggtgaaatgcttggtcagggatacattaattgtggggctgcctctagtccccagagaga 122
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tggtgaaatgcttggtcaggggtacattaattgtggggctgcctctagtccccagagaga 322

                                                                       
Query: 123 cctatccactgctacgcaacaggatccagcaggaggagaacggtgtaaatggctgtctgg 182
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 323 cctatccactgctacgcaacagaatccagcaggaggagaacggtgtaaatggctgtctgg 382

                                                                       
Query: 183 tgaccagatggacagggcaaggacttcaggaaggagtagccattgtttgaaagaacactg 242
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tgaccagatggacagggcaaagacttcaggaaggagtagccattgtttgaaagaacactg 442

                                                                       
Query: 243 ctcccttgagcagaagagttctgaatccagcctccatgcttcaagctccctgctctcccc 302
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 443 ctcccttgagcagaagagttctgaatccagcctccaggcttcaagctccctgctctcccc 502

                                                                       
Query: 303 gtacactgcgacctctctaaaaaagccacaggacatttgctttgcattgaggtgaagcag 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gtacactgcgacctctctaaaaaagccacaggacatttgctttgcattgaggtgaagcag 562

                                                                       
Query: 363 aacaatttggagcagactcagccccagctacagagaagcctctgacgcaatccgtggtag 422
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aagaatttggagcagactcagccccagctacagagaagcctctgacgcaatccgtggtag 622

                                                                       
Query: 423 gtaaaatttagcagggacaccacctaccctcatacccctgcatatgctgtgccccacgag 482
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gtaaattttagcagggacaccacctaccctcatacccctgcatatgctgtgccccacgag 682

                                                                       
Query: 483 gagccttcctgccaggaaccccagcacagtgtgttccctgggccagctgaaggtgtggcc 542
           ||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 683 gagccttcctgccagaaaccccagcacagtgtgttccctgggccagctggtggtgtggcc 742

                                 
Query: 543 ttcattccttttgcatggcatg 564
           ||||||||||||||||||||||
Sbjct: 743 ttcattccttttgcatggcatg 764


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 964
Length adjustment: 10
Effective length of query: 554
Effective length of database: 954
Effective search space:   528516
Effective search space used:   528516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)