Query= MSMg01no339_e13.b1 MSMg01no339_e13.b1 CHROMAT_FILE:
MSMg01no339_e13.b1 PHD_FILE: MSMg01no339_e13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:05 2005
(583 letters)
>mm_chr12_31163644_31164626
Length = 983
Score = 1127 bits (583), Expect = 0.0
Identities = 583/583 (100%)
Strand = Plus / Plus
Query: 1 acagttttaacacatactgtgttgtacttaaatcatcagctacagtgtgatgtgaaactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagttttaacacatactgtgttgtacttaaatcatcagctacagtgtgatgtgaaactc 260
Query: 61 cttaacatagacgcataacttggcaaagactgcaagattcttccttgtctcctgtgtcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttaacatagacgcataacttggcaaagactgcaagattcttccttgtctcctgtgtcac 320
Query: 121 cctaaccctggctttctacaccttatattagtatccaccccttaaaataaaaccaattcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctaaccctggctttctacaccttatattagtatccaccccttaaaataaaaccaattcc 380
Query: 181 ttctctgctttctctggtttaaaaagtttgactacacctgagatacccacagagaaatag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttctctgctttctctggtttaaaaagtttgactacacctgagatacccacagagaaatag 440
Query: 241 acatcttttattagatttggacttctgggaaggtgtaactcaggtttgaaaatggtggag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acatcttttattagatttggacttctgggaaggtgtaactcaggtttgaaaatggtggag 500
Query: 301 gtcttctgtgattagtggctgctgaccctattctctgaagaccactctggtctctaatgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtcttctgtgattagtggctgctgaccctattctctgaagaccactctggtctctaatgg 560
Query: 361 agagccgtctctcccctggtgaccatggccttcccacccagttctgctaaagccaatgtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agagccgtctctcccctggtgaccatggccttcccacccagttctgctaaagccaatgtc 620
Query: 421 ccttctgttgccgtgtaatctacactcctgtgacgcaggctcctttctgaactttgagtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccttctgttgccgtgtaatctacactcctgtgacgcaggctcctttctgaactttgagtt 680
Query: 481 ttcaccgaaggacgtggggatggagaaatgcctgcagagggcttgcagagcagaggtgat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttcaccgaaggacgtggggatggagaaatgcctgcagagggcttgcagagcagaggtgat 740
Query: 541 gctctgtcctcttcctgaagtgtgtctcccagaatctcctgga 583
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gctctgtcctcttcctgaagtgtgtctcccagaatctcctgga 783
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space: 557529
Effective search space used: 557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no339_e13.g1 MSMg01no339_e13.g1 CHROMAT_FILE:
MSMg01no339_e13.g1 PHD_FILE: MSMg01no339_e13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:05 2005
(519 letters)
>mm_chr12_31338086_31339005
Length = 920
Score = 944 bits (488), Expect = 0.0
Identities = 512/520 (98%), Gaps = 1/520 (0%)
Strand = Plus / Minus
Query: 1 agttcttcctcacagttcagctctttagtgtctatagtcccccctcctccctctcctttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 agttcttcctcacagttcagctctttagtgtctatagtcccccctcctccctctcctttc 661
Query: 61 ttcctcttcttcccctccaccatttgacatactgactcacgatgaaactcaaactaatta 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 660 ttcctcttcttcccctccaccatttgacatactgactcatgatgaaactcaaactaatta 601
Query: 121 taagacgtttaaaattaaatcttaccaagaatacagaatgaagctgtctttactgtgact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 taagacgtttaaaattaaatcttaccaagaatacagaatgaagctgtctttactgtgact 541
Query: 181 aggatttctttatcctcaatcatcaattcactgtgaacatttttatgtacttagagatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 aggatttctttatcctcaatcatcaattcactgtgaacatttttatgtacttagagatca 481
Query: 241 ttgcatctcctcttttgtaagtatctaaatgttatattgggttatttctggaattcattc 300
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 480 ttgcatctcctcttttgtaagtatctaaatgttatattgggttatttctgggattcattc 421
Query: 301 ataatttttattttgatacaagtactgtgtgagcatggttcatgtgaatatcgcatctca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ataatttttattttgatacaagtactgtgtgagcatggttcatgtgaatatcgcatctca 361
Query: 361 gactgcattctatacctatcaatgttgaaaatttttagcgtgtttattggtcacttaaat 420
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 360 gactgcattctatacctatcaatgttgaaaatttttagtgtgtttattggtcacttaaat 301
Query: 421 attttctc-ttttgaagtatgtattcacatattttacctattttaattaaagtgcataat 479
|||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||| |
Sbjct: 300 attttctccttttgacgtatttattcacatattttacctattttaattaaagtgcatagt 241
Query: 480 tttatagttaaaactcagacattatttgcataatctgagt 519
||||||||||||||||||||||||||||||| ||||||||
Sbjct: 240 tttatagttaaaactcagacattatttgcatgatctgagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 920
Length adjustment: 10
Effective length of query: 509
Effective length of database: 910
Effective search space: 463190
Effective search space used: 463190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
