Query= MSMg01no343_d18.b1 MSMg01no343_d18.b1 CHROMAT_FILE:
MSMg01no343_d18.b1 PHD_FILE: MSMg01no343_d18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:59 2005
(446 letters)
>mm_chr12_59510308_59511154
Length = 847
Score = 818 bits (423), Expect = 0.0
Identities = 438/443 (98%), Gaps = 1/443 (0%)
Strand = Plus / Plus
Query: 5 gaattccaatagactccatgaatacttgatttacaaaacaaagaaactcagaaatgaata 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaatagactccatgaatacttgatttacaaaacaaagaaactcagaaatgaata 264
Query: 65 taatgtgttgggcctagaatgagggatggcacatagagagcagagcagcagccccgggaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taatgtgttgggcctagaatgagggatggcacatagagagcagagcagcagccccgggaa 324
Query: 125 ggcaggtggctaacaaggcagtgctgaactgctgctgagacagatggcaaaggtatgtga 184
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggcaagtggctaacaaggcagtgctgaactgctgctgagacagatggcaaaggtatgtga 384
Query: 185 ggcagctcactgggcgtttcagagaacggctcctttgagagggacatggatgttcaaatg 244
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggcagctcactgggcatttcagagaacggctcctttgagagggacatggatgttcaaatg 444
Query: 245 caagtcaatcactgggcagtcatgatgaacttcaatttcagtgtctaagtattttgcaca 304
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 445 caagtcaatcactgggcagtcatgacgaacttcaatttcagtgtctaagtattttgcaca 504
Query: 305 catttgttattgacatttgctcaatcagaggaaagggggcctagtcttagatgttcccat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 catttgttattgacatttgctcaatcagaggaaagggggcctagtcttagatgttcccat 564
Query: 365 gactctaaatctgtttcaaattaaatacattaagttaaataagcaaataaaaaaaacttt 424
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 565 gactctaaatctgtttcaaattaaatacattaagttaaataagcaaatagaaaaaacttt 624
Query: 425 tttttaaa-ggtccaattaagta 446
|||||||| ||||||||||||||
Sbjct: 625 tttttaaaaggtccaattaagta 647
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 847
Length adjustment: 10
Effective length of query: 436
Effective length of database: 837
Effective search space: 364932
Effective search space used: 364932
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no343_d18.g1 MSMg01no343_d18.g1 CHROMAT_FILE:
MSMg01no343_d18.g1 PHD_FILE: MSMg01no343_d18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:59 2005
(345 letters)
>mm_chr12_59685545_59686287
Length = 743
Score = 656 bits (339), Expect = 0.0
Identities = 343/345 (99%), Gaps = 2/345 (0%)
Strand = Plus / Minus
Query: 1 agtggatgcccatggaaacaattaagctaattgtctttaggggatccattttcagatttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 agtggatgcccatggaaacaattaagctaattgtctttaggggatccattttcagatttc 484
Query: 61 ttctccaatttgccctgctctgtctgagcctgcctggactctgttctttctagtcctttt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 483 ttctccaatttgccctgctctgtctgagcctgcctggactctgttctttctagtcc--tt 426
Query: 121 ttttttttgtgatgttactcgagatcaataagcatagtcagactttacaataggaggaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ttttttttgtgatgttactcgagatcaataagcatagtcagactttacaataggaggaat 366
Query: 181 tcacataggcactctgtcttcattgtttgttatcagccaggtcctcacccttgcaccttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tcacataggcactctgtcttcattgtttgttatcagccaggtcctcacccttgcaccttg 306
Query: 241 aattatttgggcttagctggaataaaccaggcattatggctctaccaatgtgctagccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 aattatttgggcttagctggaataaaccaggcattatggctctaccaatgtgctagccag 246
Query: 301 accaaagcggtacacagtgtctatgcacctttgataactgactgc 345
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 accaaagcggtacacagtgtctatgcacctttgataactgactgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 743
Length adjustment: 9
Effective length of query: 336
Effective length of database: 734
Effective search space: 246624
Effective search space used: 246624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
