Query= MSMg01no344_d07.b1 MSMg01no344_d07.b1 CHROMAT_FILE:
MSMg01no344_d07.b1 PHD_FILE: MSMg01no344_d07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:19 2005
(467 letters)
>mm_chr12_34365558_34366428
Length = 871
Score = 880 bits (455), Expect = 0.0
Identities = 463/467 (99%), Gaps = 4/467 (0%)
Strand = Plus / Plus
Query: 5 gaattccacaaaaatgaagttagcaaaatatccacaataatccaccttagtggagcccaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccacaaaaatgaagttagcaaaatatccacaataatccaccttagtggagcccaa 264
Query: 65 gtggcccactgtctgtcaacagctagagatgaaagacttggtagcagaggagatagaagc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtggcccactgtctgtcaacagctagagatgaaagacttggtagcagaggagatagaagc 324
Query: 125 aggtctctgacaagcatctaaaataaagacttttaactttcaagggacttgcaaaggacc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aggtctctgacaagcatctaaaataaagacttttaactttcaagggacttgcaaaggacc 384
Query: 185 tttgtttgctaagaatgagaataaaaatctataaatctacaaaacctttaaatctatagt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttgtttgctaagaatgagaataaaaatctataaatctacaaaacctttaaatctatagt 444
Query: 245 tatctttgtaatagctaacttcatttgtagattgtcatttttatgggatgaggacttcca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tatctttgtaatagctaacttcatttgtagattgtcatttttatgggatgaggacttcca 504
Query: 305 ttctaaaactgaaacacttgagctatgacaaggttgttctagctaatggaactacaaggc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttctaaaactgaaacacttgagctatgacaaggttgttctagctaatggaactacaaggc 564
Query: 365 aagttgtctggcactataactctaagacataagcagggactttgtctagaaagtactgtg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aagttgtctggcactataactctaagacataagcagggactttgtctagaaagtactgtg 624
Query: 425 acaatcactgactt--ttt--gaaggatggaaacatcaacactgtgt 467
|||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 625 acaatcactgacttacttttagaaggatggaaacatcaacactgtgt 671
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 871
Length adjustment: 10
Effective length of query: 457
Effective length of database: 861
Effective search space: 393477
Effective search space used: 393477
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no344_d07.g1 MSMg01no344_d07.g1 CHROMAT_FILE:
MSMg01no344_d07.g1 PHD_FILE: MSMg01no344_d07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:19 2005
(521 letters)
>mm_chr12_34513652_34514572
Length = 921
Score = 938 bits (485), Expect = 0.0
Identities = 485/485 (100%)
Strand = Plus / Minus
Query: 1 tatgtttttgaagaagctgaggtcacaaaactcttgtctaggtgtgatcttctgacatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tatgtttttgaagaagctgaggtcacaaaactcttgtctaggtgtgatcttctgacatgg 426
Query: 61 gccaatgccagctgacatctgggccacatgtgttacaccactgatattcatcaaaagcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gccaatgccagctgacatctgggccacatgtgttacaccactgatattcatcaaaagcta 366
Query: 121 gtatttaggactctgactggcagctctcagggtgatcatgcatccacatcctgtggaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gtatttaggactctgactggcagctctcagggtgatcatgcatccacatcctgtggaata 306
Query: 181 caactgagggagcagttatcctcctgtgaatttctgggaaaaaattttcattagaatgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 caactgagggagcagttatcctcctgtgaatttctgggaaaaaattttcattagaatgga 246
Query: 241 attgcctgtattttgaatgccattatgatttttaaaaaatgtttagggactggggagatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 attgcctgtattttgaatgccattatgatttttaaaaaatgtttagggactggggagatg 186
Query: 301 gatcagtggttaaaagcactgactgctcttccagaggtcctgagttcaattcctagcaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 gatcagtggttaaaagcactgactgctcttccagaggtcctgagttcaattcctagcaac 126
Query: 361 cacatggtggctcacaaccatctctaatgggatccgataccatcctctggtgtgtttgta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 cacatggtggctcacaaccatctctaatgggatccgataccatcctctggtgtgtttgta 66
Query: 421 gacagctacagtgtactcatatacataaaaaatatttttaaatgtttaatgttgaataat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 gacagctacagtgtactcatatacataaaaaatatttttaaatgtttaatgttgaataat 6
Query: 481 ttaat 485
|||||
Sbjct: 5 ttaat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 921
Length adjustment: 10
Effective length of query: 511
Effective length of database: 911
Effective search space: 465521
Effective search space used: 465521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
