Query= MSMg01no344_i16.b1 MSMg01no344_i16.b1 CHROMAT_FILE:
MSMg01no344_i16.b1 PHD_FILE: MSMg01no344_i16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:45 2005
(444 letters)
>mm_chr12_109254759_109255603
Length = 845
Score = 779 bits (403), Expect = 0.0
Identities = 427/435 (98%), Gaps = 1/435 (0%)
Strand = Plus / Minus
Query: 1 gggaggcagagtcaaccagcagtggcggctgaatggggcagtagaaagacaaagagatgc 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gggaggcagtgtcaaccagcagtggcggctgaatggggcagtagaaagacaaagagatgc 376
Query: 61 ccttcagaccttctcctgcaggggcc-aggttggagggccacgtgcagaaatgtgaaatt 119
||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 375 ccttcagactttctcctgcaggggccaaggttggagggccatgtgcagaaatgtgaaatt 316
Query: 120 gaaacacttctcagtcaaagtaggtcaggttttaaccaaagccagtgtgtgggactctgg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gaaacacttctcagtcaaagtaggtcaggttttaaccaaagccagtgtgtgggactctgg 256
Query: 180 gggtgctgtgaagaaacacttccagccctggagacttttcagtgtctataccgaaggttt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gggtgctgtgaagaaacacttccagccctggagacttttcagtgtctataccgaaggttt 196
Query: 240 ttaacctgtgttttgcaacccttttggggcgtggttcaatgactctttcacagggatcac 299
|||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 195 ttaacctgtgggttgcaacccttttggggcggggttcaatgactctttcacagggatcac 136
Query: 300 gtatcagatatgctatatatcaggtttttacactactgttcataactgtaccaaagttac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 gtatcagatatgctatatatcaggtttttacactactgttcataactgtaccaaagttac 76
Query: 360 ggttataaagtagcaatgaaaataattttatggttgggcatcaccacaacatgagaaact 419
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 ggttatgaagtagcaatgaaaataattttatggttgggcatcaccacaacatgagaaact 16
Query: 420 gcattgaacggttgc 434
|||||||||||||||
Sbjct: 15 gcattgaacggttgc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 845
Length adjustment: 10
Effective length of query: 434
Effective length of database: 835
Effective search space: 362390
Effective search space used: 362390
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no344_i16.g1 MSMg01no344_i16.g1 CHROMAT_FILE:
MSMg01no344_i16.g1 PHD_FILE: MSMg01no344_i16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:45 2005
(392 letters)
>mm_chr12_109082931_109083722
Length = 792
Score = 750 bits (388), Expect = 0.0
Identities = 391/392 (99%)
Strand = Plus / Plus
Query: 1 actctctgatttcttcccaaacttctccaaggcaacagattttcacttccttttaagatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actctctgatttcttcccaaacttctccaaggcaacagattttcacttccttttaagatt 260
Query: 61 tctttttgttcatagagagacatcagcagaccactcagttcttaaatgccaggcatccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctttttgttcatagagagacatcagcagaccactcagttcttaaatgccaggcatccac 320
Query: 121 ttggtcctgctgcgtggagtgtctggcttcttgctaactcctcagaggtgggcattagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttggtcctgctgcgtggagtgtctggcttcttgctaactcctcagaggtgggcattagct 380
Query: 181 taggttgtgggaggggccacacaggctgcagcatctagacagatctggatttgaatcctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taggttgtgggaggggccacacaggctgcagcatctagacagatctggatttgaatcctc 440
Query: 241 tctcagactctggttaactgtacaaagtacgcactcaataaactcaaccttgcttctgcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctcagactctggttaactgtacaaagtacgcactcaataaactcaaccttgcttctgcc 500
Query: 301 cctctcctcttccttctcaccgcccatcaccaccccaaagggcataagaagagactaatc 360
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctctcctcttccttctcactgcccatcaccaccccaaagggcataagaagagactaatc 560
Query: 361 ctgcttgaagacatttatggctcttgatggga 392
||||||||||||||||||||||||||||||||
Sbjct: 561 ctgcttgaagacatttatggctcttgatggga 592
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 792
Length adjustment: 9
Effective length of query: 383
Effective length of database: 783
Effective search space: 299889
Effective search space used: 299889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
