Query= MSMg01no345_a18.b1 MSMg01no345_a18.b1 CHROMAT_FILE:
MSMg01no345_a18.b1 PHD_FILE: MSMg01no345_a18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:25 2005
(508 letters)
>mm_chr12_32091160_32092067
Length = 908
Score = 692 bits (358), Expect = 0.0
Identities = 385/396 (97%), Gaps = 4/396 (1%)
Strand = Plus / Minus
Query: 113 tgtgtgactttcctcacccccataacagggcagtagtcagatctgcccagccagggatca 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908 tgtgtgactttcctcacccccataacagggcagtagtcagatctgcccagccagggatca 849
Query: 173 ctttttttttttttttttttttttttttgggtcaaggtaaagtttttccttgtaaccttg 232
| ||||||||||||||||||||||||| ||||| || |||||||||||||| |||||
Sbjct: 848 c----tttttttttttttttttttttttggttcaagttagagtttttccttgtagccttg 793
Query: 233 gctgtccaggctggcctcaaactcacagagatcatgtgcctccagagtgctgggattaaa 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 gctgtccaggctggcctcaaactcacagagatcatgtgcctccagagtgctgggattaaa 733
Query: 293 ggcatgtgccaccaccaaccaactccacaagtcaccttttgcctcctcaggtttcatatt 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 ggcatgtgccaccaccaaccaactccacaagtcaccttttgcctcctcaggtttcatatt 673
Query: 353 tactttccagtggtctctacaaactgtggcatctggcagatcctctctggtgtccagaag 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 tactttccagtggtctctacaaactgtggcatctggcagatcctctctggtgtccagaag 613
Query: 413 tgtaagcaccaaataccttgaccactttccaggggtggaaatcacccaagtttcattgct 472
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 612 tgtaagcaccaaataccttgaccactttccaggggtgtaaatcacccaagtttcattgct 553
Query: 473 tttcccttggcttggctttcctcatctcttaaacag 508
||||||||| |||| |||||||||||||||||||||
Sbjct: 552 tttcccttgccttgtctttcctcatctcttaaacag 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 908
Length adjustment: 10
Effective length of query: 498
Effective length of database: 898
Effective search space: 447204
Effective search space used: 447204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no345_a18.g1 MSMg01no345_a18.g1 CHROMAT_FILE:
MSMg01no345_a18.g1 PHD_FILE: MSMg01no345_a18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:25 2005
(520 letters)
>mm_chr12_31937720_31938639
Length = 920
Score = 959 bits (496), Expect = 0.0
Identities = 514/520 (98%)
Strand = Plus / Plus
Query: 1 actcatcttgaggtaactagctagaccttgggatacagattttaacattacaatacaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actcatcttgaggtaactagctagaccttgggatacagattttaacattacaatacaaag 260
Query: 61 caactgaccaaagtctacacctaggtttggggattttatgtgtatatttactttgtcatg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 caactgaccaaagtctacacctaggtttggggattttatgtgtatatttactttatcatg 320
Query: 121 ctggaggtaaacccaaggcttcgtgcatgccaaacaagtgttccaccacggattacaccc 180
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 ctggaggtaaacccaagacttcgtgcatgccaaacaagtgttccaccccggattacaccc 380
Query: 181 ctagctccaaacctgagattgagaataatcacgtttcctccgttgtatttgtcttctgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctagctccaaacctgagattgagaataatcacgtttcctccgttgtatttgtcttctgtt 440
Query: 241 cagatggctgtggtactggctatagagcagattattgcaatgtatagatgtttctacatc 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 441 cagatggctgtggtactggctatagagcagattattgcaatgtatagatgtttctacacc 500
Query: 301 ttatttccttaacaaaatagaaaacctattaacttaccttggggaagcaatgctaatata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttatttccttaacaaaatagaaaacctattaacttaccttggggaagcaatgctaatata 560
Query: 361 caagcaacatgaaagatttgaatatttacggcaacatatttcccagagcaggagaaaaat 420
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 561 caagcaacatgaaagatttgaatatttacggcaacatatttcccagaacaggagaaaaat 620
Query: 421 ctgtctctactctaccacgtctttctatattttgactggaatataaggcaaagcattcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 621 ctgtctctactctaccacgtctttctatattttgactggaatataaggcaaagcatttag 680
Query: 481 ttatcaaaaataaatcatagctatgtttacattgcattca 520
||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttatcaaaaataaatcatagctatgtttacattgcattca 720
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 920
Length adjustment: 10
Effective length of query: 510
Effective length of database: 910
Effective search space: 464100
Effective search space used: 464100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
