Query= MSMg01no347_c18.b1 MSMg01no347_c18.b1 CHROMAT_FILE:
MSMg01no347_c18.b1 PHD_FILE: MSMg01no347_c18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:04 2005
(420 letters)
>mm_chr12_100536913_100537732
Length = 820
Score = 774 bits (400), Expect = 0.0
Identities = 412/416 (99%)
Strand = Plus / Minus
Query: 5 gaattcagagagctcatcgggttgaagttgtgggaaaatgccttcctggggtctgaaatt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gaattcagagagctcatcgggttgaagttgtgggaaaatgccttcctggggtctgaaatt 561
Query: 65 taggttgatccttaaaggcaacgtctgctgagaacatagacaagggcaggcaaagcagag 124
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 560 taggttgatccttaaaggcagcgtctgctgagaacatagacaagggcaggcaaagcagag 501
Query: 125 aatgggctcagatgggtcctaaaggcatatagtctgtgtgttaaaggcttgccccaggca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aatgggctcagatgggtcctaaaggcatatagtctgtgtgttaaaggcttgccccaggca 441
Query: 185 acatcttaaggacagcgggaaggtgttgggaaaggatggcaggacttgtgagctcacagt 244
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 440 acatcttaaggacagcgggaaggtgttgggaaagggtggcaggacttgtgagctcacagc 381
Query: 245 aggacttagcacagactgttcctgccttgccctgagagcttttgtttccgctgaagtctt 304
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 380 aggacttagcacagactgttcctgccttgccctgcgagcttttgtttccgctgaagtctt 321
Query: 305 caaatgcacgattacacagcagttcactatgtagagaggacttacacaaatgttgacatg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 caaatgcacgattacacagcagttcactatgtagagaggacttacacaaatgttgacatg 261
Query: 365 gaacaagagttccagtgacacccctgaccccagcgatacccctgtcagccccaggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gaacaagagttccagtgacacccctgaccccagcgatacccctgtcagccccaggg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 820
Length adjustment: 9
Effective length of query: 411
Effective length of database: 811
Effective search space: 333321
Effective search space used: 333321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no347_c18.g1 MSMg01no347_c18.g1 CHROMAT_FILE:
MSMg01no347_c18.g1 PHD_FILE: MSMg01no347_c18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:04 2005
(531 letters)
>mm_chr12_100352616_100353545
Length = 930
Score = 973 bits (503), Expect = 0.0
Identities = 522/531 (98%), Gaps = 6/531 (1%)
Strand = Plus / Plus
Query: 1 aagacagggtttagcgaacaggatatgtttaggttagaaaatataaaaagagggaccact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagacagggtttagcgaacaggatatgtttaggttagaaaatataaaaagagggaccact 260
Query: 61 gtatagagaaacatgattggacaagaagggtatgccgtaatggtaaaaatttgaaaaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtatagagaaacatgattggacaagaagggtatgccgtaatggtaaaaatttgaaaaggg 320
Query: 121 aagcccagaaggtcctatctactctgattcttttgtcttctctctgacagggcttcttcc 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagcccagaaggtcctatct-ctctgattcttttgtcttctctctgacagggcttcttcc 379
Query: 181 tcctcaatgaggcacaacccctctggaatgagagtctataactgtctcagttatggtttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tcctcaatgaggcacaacccctctggaatgagagtctataactgtctcagttatggtttc 439
Query: 241 gattgttgtgataaaacaccatgaccagagcaactttgagaggaaagaatttatttcagc 300
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 440 gattgttgtgataaaacaccatgacca-----actttgagaggaaagaatttatttcagc 494
Query: 301 atgcagtttcacatcccaatccatcatgaaaggaagttggggcaggaacacaaggcagga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 atgcagtttcacatcccaatccatcatgaaaggaagttggggcaggaacacaaggcagga 554
Query: 361 acctggaggtagaaaccgaagcagatgccatacaggaatcctgcttctggttttctcagc 420
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 acctggaggtagaaactgaagcagatgccatacaggaatcctgcttctggttttctcagc 614
Query: 421 ctgccttcttatacacatcagaaccacctgcccagggatggcatcaccaacagtggtatg 480
||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 615 ctgccttcttatacacatcagaaccacctgctcagggatggcatcacccacagtggtatg 674
Query: 481 ggccctcccacattaatcatttatcaagaaaatggcctacagactcatcta 531
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 ggccctcccacattaatcatttatcaagaaaatggcctacagactcatcta 725
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 930
Length adjustment: 10
Effective length of query: 521
Effective length of database: 920
Effective search space: 479320
Effective search space used: 479320
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
