Query= MSMg01no347_i10.b1 MSMg01no347_i10.b1 CHROMAT_FILE:
MSMg01no347_i10.b1 PHD_FILE: MSMg01no347_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:32 2005
(457 letters)
>mm_chr12_77243834_77244690
Length = 857
Score = 638 bits (330), Expect = 0.0
Identities = 348/354 (98%)
Strand = Plus / Minus
Query: 104 atggaggaggaactatggaagccatggccccaggcacaagtctcttgcggccatcggttg 163
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 657 atggaggaggaactatggaagccatggccccaggcgcaagtctcttgtggccatcggttg 598
Query: 164 gctgggccccgcgtgtcttctgagctttctggagctcttctgctgtccagctttgttttg 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 gctgggccccgcgtgtcttctgagctttctggagctcttctgctgtccagctttgttttg 538
Query: 224 tctagtgtcgccacctttgccaggacgatttcattttgtctgctgtttcccagagaagaa 283
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 tctagcgtcgccacctttgccaggacgatttcattttgtctgctgtttcccagagaagaa 478
Query: 284 aaacacagaggcactttcctctagtttgtatttcaagtgttttccaaacaccatttgcgg 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 aaacacagaggcactttcctctagtttgtatttcaagtgttttccaaacaccatttgcgg 418
Query: 344 gatctcccaggaagaaaggagatgagactactcactatgaaaagctattcagcagtctct 403
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 417 gatctcccaggaagaaaggagatgagactactcactatgaaaagctattcagcggtctct 358
Query: 404 ctacccttcccgcccttcctgcccttcccctgttagtctttctccaagcctagt 457
||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 357 ctacccttctcgccctttctgcccttcccctgttagtctttctccaagcctagt 304
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 857
Length adjustment: 10
Effective length of query: 447
Effective length of database: 847
Effective search space: 378609
Effective search space used: 378609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no347_i10.g1 MSMg01no347_i10.g1 CHROMAT_FILE:
MSMg01no347_i10.g1 PHD_FILE: MSMg01no347_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:32 2005
(487 letters)
>mm_chr12_77070428_77071314
Length = 887
Score = 897 bits (464), Expect = 0.0
Identities = 482/488 (98%), Gaps = 2/488 (0%)
Strand = Plus / Plus
Query: 1 agccttgaaggcagggctggaagcccaggaggccgaggaggaaaggtaggtactttcatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agccttgaaggcagggctggaagcccaggaggccgaggaggaaaggtaggtactttcatg 260
Query: 61 taaccgaatatcattttgttggtctttataatgaatgtgcacatcagaagaaatttgaat 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 taaccgaatatcattttgttggtctttataatgaatgtgcacatcagaggaaatttgaat 320
Query: 121 gtggaaaagtttaaagagtcaccaaagaaaaccatgctaaatgtttcattttattttagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtggaaaagtttaaagagtcaccaaagaaaaccatgctaaatgtttcattttattttagt 380
Query: 181 ttcttcttgtttagtatttgatacacataataatactatatataaaatgtgtagata-gt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 381 ttcttcttgtttagtatttgatacacataataatactatatataaaatgtgtagataagt 440
Query: 240 ataaggaatgaagatatacccaaagtgcccaagataaacctcattaacatgagttctctc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataaggaatgaagatatacccaaagtgcccaagataaacctcattaacatgagttctctc 500
Query: 300 atgagcttctccttttactaggaaataattttatattgttgtttttttttgttgcattta 359
|||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 501 atgagcttctccttttactaggaaataattttatattgttgtatttttt-gttgcattta 559
Query: 360 tgtcctgttcttactatcttcgctctgttgttctgtaactccatatttttcaagctcatc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tgtcctgttcttactatcttcgctctgttgttctgtaactccatatttttcaagctcatc 619
Query: 420 actttgaccatgaggtttagtcagactcttgtctgtatcacacactgttgttgatggaca 479
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 620 actttgaccatgaggtttagtcagactcttgtctatagcacacactgttgttgatggaca 679
Query: 480 tttgagtt 487
||||||||
Sbjct: 680 tttgagtt 687
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 887
Length adjustment: 10
Effective length of query: 477
Effective length of database: 877
Effective search space: 418329
Effective search space used: 418329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
