Query= MSMg01no347_l05.b1 MSMg01no347_l05.b1 CHROMAT_FILE:
MSMg01no347_l05.b1 PHD_FILE: MSMg01no347_l05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:45 2005
(470 letters)
>mm_chr12_113118821_113119690
Length = 870
Score = 808 bits (418), Expect = 0.0
Identities = 418/418 (100%)
Strand = Plus / Minus
Query: 53 gagtaatgcagattaaaaatacatatggggcagggtatagtagacttttgtttttatttt 112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 gagtaatgcagattaaaaatacatatggggcagggtatagtagacttttgtttttatttt 811
Query: 113 tgtttttttgtttctttgtttttttgagacagggtttctctgtgtagccctggctgtcct 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 tgtttttttgtttctttgtttttttgagacagggtttctctgtgtagccctggctgtcct 751
Query: 173 ggaactcactttgtagaccaggctggcctcaaactcagaaatctgcctgcctctgacacc 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 ggaactcactttgtagaccaggctggcctcaaactcagaaatctgcctgcctctgacacc 691
Query: 233 caagtgctgggattaaaggccaagaacatttaattagaaagtttatatggtttaggtcaa 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 caagtgctgggattaaaggccaagaacatttaattagaaagtttatatggtttaggtcaa 631
Query: 293 ataatttttctgttccattgttgtggttaattggaggaaatgccatgattctttgctctt 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 ataatttttctgttccattgttgtggttaattggaggaaatgccatgattctttgctctt 571
Query: 353 atcccacagtatatatagtgcctacatggggaaaagctctcagtttgcaattgataactt 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 atcccacagtatatatagtgcctacatggggaaaagctctcagtttgcaattgataactt 511
Query: 413 taaataaaagcattaggtataacctggctaattgaaatataaacgaatgatgaaagat 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 taaataaaagcattaggtataacctggctaattgaaatataaacgaatgatgaaagat 453
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 870
Length adjustment: 10
Effective length of query: 460
Effective length of database: 860
Effective search space: 395600
Effective search space used: 395600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no347_l05.g1 MSMg01no347_l05.g1 CHROMAT_FILE:
MSMg01no347_l05.g1 PHD_FILE: MSMg01no347_l05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:45 2005
(481 letters)
>mm_chr12_112935879_112936759
Length = 881
Score = 917 bits (474), Expect = 0.0
Identities = 480/482 (99%), Gaps = 2/482 (0%)
Strand = Plus / Plus
Query: 1 ttgcaccttaagcacacacccaaacccagcttatgtgacctcatcccatgactaactttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgcaccttaagcacacacccaaacccagcttatgtgacctcatcccatgactaactttt 260
Query: 61 cctgtcgtcaggcaggccaaaccccacaactgcactttagtccctaaggccagcctcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctgtcgtcaggcaggccaaaccccacaactgcactttagtccctaaggccagcctcctt 320
Query: 121 gctgtctgcctgtctatctcagtcctgctctgcctcttctgttggtcctatcttcctggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctgtctgcctgtctatctcagtcctgctctgcctcttctgttggtcctatcttcctggc 380
Query: 181 cccacacatggggacagttaggacagtgttctgtcctaaaacacccacattctcgcactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccacacatggggacagttaggacagtgttctgtcctaaaacacccacattctcgcactg 440
Query: 241 gtcatccagagtccacctttgacccaggcccttctagcttttgatttgtacctctgagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtcatccagagtccacctttgacccaggcccttctagcttttgatttgtacctctgagat 500
Query: 301 ctcccaggctctgagaagtaagccttgctctgagcttcccatggctgttcccactggaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctcccaggctctgagaagtaagccttgctctgagcttcccatggctgttcccactggaat 560
Query: 361 gcctccctctctgggggatttttgttaaggaagtgtccctaaagtagccttcactgcctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcctccctctctgggggatttttgttaaggaagtgtccctaaagtagccttcactgcctt 620
Query: 421 ccctgtaaaggttgcccctttcccctttctcctngg-acgtttgtggcatcaaggttggg 479
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 621 ccctgtaaaggttgcccctttcccctttctcct-ggtacgtttgtggcatcaaggttggg 679
Query: 480 aa 481
||
Sbjct: 680 aa 681
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 881
Length adjustment: 10
Effective length of query: 471
Effective length of database: 871
Effective search space: 410241
Effective search space used: 410241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
