Query= MSMg01no350_o03.b1 MSMg01no350_o03.b1 CHROMAT_FILE:
MSMg01no350_o03.b1 PHD_FILE: MSMg01no350_o03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:58 2005
(176 letters)
>mm_chr12_117289298_117289876
Length = 579
Score = 304 bits (157), Expect = 2e-87
Identities = 172/179 (96%), Gaps = 7/179 (3%)
Strand = Plus / Plus
Query: 1 ctgatagttacctgagagcagcattggagaacttgtgca-gggatgagaacaggagacta 59
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 ctgatagttacctgagagcagcattggagaacttgtgcaagggatgagaacaggagacta 260
Query: 60 aagcggagtgtaggtttttctctgtagatttataagcttagaggactccctttctggtt- 118
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagcggagtgtaggtttttctctgtagatttataagcttagaggactccctttctggtta 320
Query: 119 --tttctatctttgtgagataggggtcttagctgtca-cagcatttgcaaactgtattg 174
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 cat--ctatctttgtgagataggggtcttagctgtcaacagcatttgcaaactgtattg 377
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 176
Length of database: 579
Length adjustment: 8
Effective length of query: 168
Effective length of database: 571
Effective search space: 95928
Effective search space used: 95928
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no350_o03.g1 MSMg01no350_o03.g1 CHROMAT_FILE:
MSMg01no350_o03.g1 PHD_FILE: MSMg01no350_o03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:58 2005
(511 letters)
>mm_chr12_117452362_117453272
Length = 911
Score = 988 bits (511), Expect = 0.0
Identities = 511/511 (100%)
Strand = Plus / Minus
Query: 1 actgcccctttgtgtgaggaaaatttagaaagtttcacccctagttgaaggaaaatggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 actgcccctttgtgtgaggaaaatttagaaagtttcacccctagttgaaggaaaatggat 652
Query: 61 acttggaagaacttgaaacctcaagctagatgtgggctcaggaacctacaagtttgggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 acttggaagaacttgaaacctcaagctagatgtgggctcaggaacctacaagtttgggat 592
Query: 121 gtgaacatcagagtcccagggaccttgagacataagagcaactgcctggtgggaagctgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 gtgaacatcagagtcccagggaccttgagacataagagcaactgcctggtgggaagctgg 532
Query: 181 gggttatggaatttcaacaagacatctgcaaaagatgagttcacatgctcacctgccagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 gggttatggaatttcaacaagacatctgcaaaagatgagttcacatgctcacctgccagc 472
Query: 241 agcatggggaaatggtgcaccttgtaagaactgtcatcccagtggaactcactggtcaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 agcatggggaaatggtgcaccttgtaagaactgtcatcccagtggaactcactggtcaat 412
Query: 301 acagactcaccttgtctcagtatcagacctgttggcaattgcacaatctaaaaaacatgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 acagactcaccttgtctcagtatcagacctgttggcaattgcacaatctaaaaaacatgt 352
Query: 361 ttagaagcaatattgtaattttgtaatttccaaaatttctaccaatgagtggttagataa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ttagaagcaatattgtaattttgtaatttccaaaatttctaccaatgagtggttagataa 292
Query: 421 tagattcaacatggttgatagaagaatcagtaacaaaatggtggatctgcagaaccgatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tagattcaacatggttgatagaagaatcagtaacaaaatggtggatctgcagaaccgatc 232
Query: 481 aagtatgtgataccagagaaaggaataggaa 511
|||||||||||||||||||||||||||||||
Sbjct: 231 aagtatgtgataccagagaaaggaataggaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
