Query= MSMg01no351_l24.b1 MSMg01no351_l24.b1 CHROMAT_FILE:
MSMg01no351_l24.b1 PHD_FILE: MSMg01no351_l24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:04 2005
(439 letters)
>mm_chr12_84080626_84081464
Length = 839
Score = 748 bits (387), Expect = 0.0
Identities = 423/435 (97%), Gaps = 2/435 (0%)
Strand = Plus / Minus
Query: 5 gaattcattatcttccataatggactactacggttagtgatttggggatccaggattgtg 64
|||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 638 gaattcattatctttcataatggactactacggttagtgattcggggatccaggattgtg 579
Query: 65 ggttaagaatgtattggagatagctgggccaaagaagtgaaacactaaaggacccccttc 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 cgttaagaatgtattggagatagctgggccaaagaagtgaaacactaaaggacccccttc 519
Query: 125 aggaagctcttggcatgaagtccaacagtttggactcaccacccatttttgctgtcccag 184
|||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 aggaagcttttggcatgaaatccaacagtttggactcaccacccatttttgctgtcccag 459
Query: 185 ttcaaggcctgaagtaaatcttgggatttaatcttctagctatagcaatgctagttaaca 244
||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 458 ttcaaggcctgaagtgaatcttgggatttcatcttctagctatagcaatgctagttaaca 399
Query: 245 gttttgagggaaactgatgtttgaatcaccgttccagtgatgacaatagtagcggcctgc 304
||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 398 gttttgaggaaaactgatgtttgaatcaccgtgccagtgatgacaatagtagcggcctgc 339
Query: 305 aagctg-tcatggcagctgacattgctatggtgcctcatttcagggagaaacttcatatc 363
|||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 aagctgct-gtggcagctgacattgctatggtgcctcatttcagggagaaacttcatatc 280
Query: 364 tctgttaactgtggaacaaactggggagagtccacatttgtttccttccagaagacccca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tctgttaactgtggaacaaactggggagagtccacatttgtttccttccagaagacccca 220
Query: 424 atagatgtcggctca 438
|||||||||||||||
Sbjct: 219 atagatgtcggctca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 839
Length adjustment: 9
Effective length of query: 430
Effective length of database: 830
Effective search space: 356900
Effective search space used: 356900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no351_l24.g1 MSMg01no351_l24.g1 CHROMAT_FILE:
MSMg01no351_l24.g1 PHD_FILE: MSMg01no351_l24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:04 2005
(401 letters)
>mm_chr12_83907822_83908622
Length = 801
Score = 762 bits (394), Expect = 0.0
Identities = 397/398 (99%)
Strand = Plus / Plus
Query: 4 ccccctcttctgtatcctctactttctggcatatcttttgtatttactattataaattta 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ccccctcttctgtatcctctactttctggcatatcttttgtatttactattataaattta 263
Query: 64 tgtcttttgtatttatattgtcttataaatcgtattatatatgtctttatatcgtattat 123
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgtcttttgtatttacattgtcttataaatcgtattatatatgtctttatatcgtattat 323
Query: 124 aaaattgtctccatcttaaaagcttatctagcatgagaaagccataggaaatagttaaca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaaattgtctccatcttaaaagcttatctagcatgagaaagccataggaaatagttaaca 383
Query: 184 aaattgtacactgagcaacctaacacttttcttggtttgtttttcctccagaaaacctct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aaattgtacactgagcaacctaacacttttcttggtttgtttttcctccagaaaacctct 443
Query: 244 ctttctcttatcatgacaacttttttggggggtgggtggactggtgggtgatactgatat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctttctcttatcatgacaacttttttggggggtgggtggactggtgggtgatactgatat 503
Query: 304 ttagaaaggaggagaaatgcagaattgcgaagttaacaacagatggttaaacagagccat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttagaaaggaggagaaatgcagaattgcgaagttaacaacagatggttaaacagagccat 563
Query: 364 ttcaggagtgttattaaaataacaaatctattttcctc 401
||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ttcaggagtgttattaaaataacaaatctattttcctc 601
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 801
Length adjustment: 9
Effective length of query: 392
Effective length of database: 792
Effective search space: 310464
Effective search space used: 310464
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
