Query= MSMg01no351_p03.b1 MSMg01no351_p03.b1 CHROMAT_FILE:
MSMg01no351_p03.b1 PHD_FILE: MSMg01no351_p03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:18 2005
(540 letters)
>mm_chr12_85473525_85474465
Length = 941
Score = 938 bits (485), Expect = 0.0
Identities = 524/537 (97%), Gaps = 1/537 (0%)
Strand = Plus / Plus
Query: 5 gaattcatgaatatttcttccttttggaaatcttaatagaaatgcattaaatgtatagac 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatgaatataaattccttttggaaatcttaatagaaatgcattaaatgtatagac 264
Query: 65 ttatttgattgatgtctttatagtaatacatttttcttacaggaagattagctcattttg 124
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttatttgattgatgtctttatagcaatacatttttcttacaggaagattagctcattttg 324
Query: 125 ttgttcttcaatacaattatttgtaagttttcatttctataaggtgttagttctcagtct 184
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 325 ttgttcttcaatacaattatttgtaagttttcatttctataaggtgttggttctcagtct 384
Query: 185 atgggctgtgtcactttgggggttgaacaaccctttcccaaggttcacctaagactattg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atgggctgtgtcactttgggggttgaacaaccctttcccaaggttcacctaagactattg 444
Query: 245 aaagcagatatttatgattcatgacagtagcaaaattacagtcatgaagtagcaatgaaa 304
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaaacagatatttatgattcatgacagtagcaaaattacagtcatgaagtagcaatgaaa 504
Query: 305 ataattttatggttggggggcaccacaatacgaggaactgtgttaaagggtttcagtatt 364
|||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 505 ataattttatggttggggggcagcacaatacaaggaactgtgttaaagggtttcagtatt 564
Query: 365 aggaaggttaagaaccactactatagagccttctacacttcttgagcaaaaatgtattcg 424
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 565 aggaaggttaagaaccactactatagagccttctacacttcttgggcaaaaatgtattcc 624
Query: 425 gaggaatttttagttcttattgctgcaataaaagaggtagcttttcttcaacatatataa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gaggaatttttagttcttattgctgcaataaaagaggtagcttttcttcaacatatataa 684
Query: 485 gataaaaggctattttttttt-aacctgcagttcagtgatagagtaaggccctgttt 540
||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||
Sbjct: 685 gataaaaggctattttttttttaacctgcagctcagtggtagagtaaggccctgttt 741
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 540
Length of database: 941
Length adjustment: 10
Effective length of query: 530
Effective length of database: 931
Effective search space: 493430
Effective search space used: 493430
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no351_p03.g1 MSMg01no351_p03.g1 CHROMAT_FILE:
MSMg01no351_p03.g1 PHD_FILE: MSMg01no351_p03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:19 2005
(333 letters)
>mm_chr12_85612577_85613309
Length = 733
Score = 545 bits (282), Expect = e-159
Identities = 309/318 (97%)
Strand = Plus / Minus
Query: 1 tctgagtgcaaggctctcctggtccacatggcaagttccagatcagttagcatcactcgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 tctgagtgcaaggctctcctggtccacatggcaagttccagatcagttagcatcactcgg 647
Query: 61 tgggaccctatctcaaaaagaaaaaggaaaataagccaggcatggtgttttgtgtctgta 120
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 646 tgggaccctatctcaaaaagaaaaaggaaaataagccacacatggtgttttgtgtctgta 587
Query: 121 tctcacagcttggagctaggtgcagcagcaagaggattgttgagcgtttaaagccagcct 180
||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||
Sbjct: 586 tctcacagcttggagctaggtgctgcagaaagaggattgttgagcgtttaaggccagcct 527
Query: 181 gggccacagagtaaggaaaaccttattgtggggtggaacaacaacagcaaagcacaactt 240
||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 526 gggccacagagtaaggaaaaccttattgtggggccgaacaacaacagcagagcacaactt 467
Query: 241 gtatttgtaaatttaataaaatgtctaggggtcttcctaagaaatgctttacatttattc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gtatttgtaaatttaataaaatgtctaggggtcttcctaagaaatgctttacatttattc 407
Query: 301 agtgcctgaggggtgtgt 318
||||||||||| ||||||
Sbjct: 406 agtgcctgaggtgtgtgt 389
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 733
Length adjustment: 9
Effective length of query: 324
Effective length of database: 724
Effective search space: 234576
Effective search space used: 234576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
