Query= MSMg01no352_g21.b1 MSMg01no352_g21.b1 CHROMAT_FILE:
MSMg01no352_g21.b1 PHD_FILE: MSMg01no352_g21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:58 2005
(469 letters)
>mm_chr12_95202140_95203008
Length = 869
Score = 855 bits (442), Expect = 0.0
Identities = 459/465 (98%)
Strand = Plus / Minus
Query: 5 gaattccaggcaactacactgaggatcttaagcccacacccacagtgacacacctactcc 64
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 gaattccaggcaactagagtgaggatcttaagcccacacccacagtgacacacctactcc 750
Query: 65 aaccaggtcacacctattccaacaaggccacacctccaaatggtgccactccctggtcca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 aaccaggtcacacctattccaacaaggccacacctccaaatggtgccactccctggtcca 690
Query: 125 agaatatacaaaccattacagtattagattaaagtctatgtatactacagcaaaagtctt 184
|| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 aggatatacaaaccatcacagtattagattaaagtctatgtatactacagcaaaagtctt 630
Query: 185 agatataagtaagtatctaagcatctctaatgagtgcattaaaagaagggataagtttaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 agatataagtaagtatctaagcatctctaatgagtgcattaaaagaagggataagtttaa 570
Query: 245 cccaagatttacagcatcttatttttcaacctgcctataaacttctgtaaaataattatg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 569 cccaagatttacagcatcttatttttcaacctgcctataaacttctgtaaaataattgtg 510
Query: 305 cagatataattaagactttatatttaattactctttggtaaacttgaacatgagactcct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 cagatataattaagactttatatttaattactctttggtaaacttgaacatgagactcct 450
Query: 365 gtcttgggttgtaaggatgggccaaatataaacactgagtagcttattataaatgggata 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gtcttgggttgtaaggatgggccaaatataaacactgagtagcttattataaatgggata 390
Query: 425 gtagaacataaaactcanagacctgaaacttacatgaaatatcaa 469
||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 389 gtagaacataaaactcaaagacctgaaacttacatgaaatatcaa 345
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space: 394281
Effective search space used: 394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no352_g21.g1 MSMg01no352_g21.g1 CHROMAT_FILE:
MSMg01no352_g21.g1 PHD_FILE: MSMg01no352_g21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:58 2005
(368 letters)
>mm_chr12_95045087_95045854
Length = 768
Score = 685 bits (354), Expect = 0.0
Identities = 363/368 (98%), Gaps = 4/368 (1%)
Strand = Plus / Plus
Query: 1 ctaacaggagcggctggagagatctttatcaatagcagaagtgagctgagttccacctgc 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 ctaacaggagcggctggagagatctttttcaatagcagaagtgagctgagttccacctgc 260
Query: 61 ttatcaagcttcaaactgaaatatctggaacttcagattcagtgggattcagtgtttctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttatcaagcttcaaactgaaatatctggaacttcagattcagtgggattcagtgtttctg 320
Query: 121 gcctattaggaaatctctactcacatacacacgcatacagagagatataaagtttataca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcctattaggaaatctctactcacatacacacgcatacagagagatataaagtttataca 380
Query: 181 aaaaaataaatctcaagtgtttctaaaaagacgcctgctactcatccatcattattctat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaaaataaatctcaagtgtttctaaaaagacgcctgctactcatccatcattattctat 440
Query: 241 tgcctatttttcagaatcccatactgtgcttgatattaatttactctcttaattacccac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgcctatttttcagaatcccatactgtgcttgatattaatttactctcttaattacccac 500
Query: 301 tgtgaaatacacacacacacacacacacacacacacacacacacacatatgtgtgtgtgt 360
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 501 tgtgaaatacacacacacacacacacacacacacacacacaca----tatgtgtgtgtgt 556
Query: 361 atgtcaga 368
||||||||
Sbjct: 557 atgtcaga 564
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 52
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
