NNCCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTTTGTTTAGCTCTGTACCCCACTTTTAATAGGGTTATTTGGT
TCTCTGGAGTCTAACTTCTTGAGTTCTTTGTATATTAGCCCTGTATCAGA
TGTATGGTTGGTAAAGGTCTTTTCCTAATCCATTGGTTGCCGTTTTGTCC
TATTGACAGTGTCCTTTGCTAAAAAAGGACATTTTTTAATTAAAAAAAAA
TTTTGTAACTGATCAAAAAATCAGAAATTTTCAATTTTAGCCATCTAATT
ACAGGAAATTGACCATGTGTAAAGGTGCAACTAGCAGAGCCAAAGGGAGA
GGCTGATCATCAAAGCTGGAGATGCCAATGCTCTCTCAGTATCTGATTGG
AGCAAGTTGGCAAGCCAGGAAGGCACGCAATCTAACAACACAACACGAGT
CAACTTCTGCTGGCTATGCACATGGCTTAATGTGAGAACATGGCCCGGGT
TTGATCCCCAGTACCACAAAACTACACACAAGGGAGGAGTAAAAATTCTC
TTCATGAGCACAGAGTTCCCCCAGAAAAAAAAATGACAAAATGGACCCAT
AAAGTGAGTTTAAATAAATCCAAAAGGCTGAGCTCTAACAGAGCATGCTC
AGTAATCACAATGGAATTAAACTGGAAACGTAAGAGAACAACATGTATGA
CATGCTCAAATGGTTTGAAATGTAGCAACAGACTTTATCTAAGCN

NNNCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGCTTACAAGTATTTTATT
TAAAAACATTGTATTTATGTTCCTAAGGGATATTTGTTTATAATTTGCAT
TGTTGTTGTTGGTTTTCATATCAGCATTGAAGTAGCTTCATAAAAAGATG
TGGCAAATGTTCCTTCAGTTTCCATTTTGTGGGATGATTTGAGAAGTGTT
AGTGATAGTTTCTTAAAGATCTTGTAGAGGGCTTCTCTTAATCCGTCTAG
AGCTTTTGTTGGGAGCTTTTTCTATTTCACTAGTGACTTCAAGTCTGTCT
AAATTGTTTATTTCCATTTTAATTTAACTTTGGTAGGATATATTTCCATT
CTTTACAGGTTTTCTAATTTGACAAATATATTTTTAAGCATGTCCTTAAG
ACTCCCTGGACTTCCTTGGTGCTTATTGTAATCTTCCTCTTCCATCTCTA
ATTGTATTGGTGTAGATCTTCTCTCCCCATCTTTTAATTAGTCTGGCTAA
GGGTTTGTCAGTATTAATGATTTTGTACAGTACAGCACTCTCGGCTGATG
ATTTAAGTATTTTACTTACTCACTTTCTGTTCATCTGCTTCGGGGGACCT
CCCCCCTTTCCTTGGAACCCAAAAACCAAGGTTTTTTTTTTTTTTCCTAA
AAATTCCCCCACTGAACCGTCCTTACCTGTCCTGAAGACCCTCCTTTTCC
ATGCTTGGAGGGAG

Query= MSMg01no354_h10.b1 MSMg01no354_h10.b1 CHROMAT_FILE:
MSMg01no354_h10.b1 PHD_FILE: MSMg01no354_h10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:37 2005
         (634 letters)



>mm_chr12_53505177_53506208
          Length = 1032

 Score = 1180 bits (610), Expect = 0.0
 Identities = 625/630 (99%), Gaps = 2/630 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctttgtttagctctgtaccccacttttaatagggttatttggttctctggagtct 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 935 gaattctttgtttagctctgtaccccacttttaatagggttatttggttctctggagtct 876

                                                                       
Query: 65  aacttcttgagttctttgtatattagccctgtatcagatgtatggttggtaaaggtcttt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 aacttcttgagttctttgtatattagccctgtatcagatgtatggttggtaaaggtcttt 816

                                                                       
Query: 125 tcctaatccattggttgccgttttgtcctattgacagtgtcctttgctaaaaaaggacat 184
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 tcctaatccattggttgccattttgtcctattgacagtgtcctttgctaaaaaaggacat 756

                                                                       
Query: 185 tttttaattaaaaaaaaattttgtaactgatcaaaaaatcagaaattttcaattttagcc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 tttttaattaaaaaaaaattttgtaactgatcaaaaaatcagaaattttcaattttagcc 696

                                                                       
Query: 245 atctaattacaggaaattgaccatgtgtaaaggtgcaactagcagagccaaagggagagg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 atctaattacaggaaattgaccatgtgtaaaggtgcaactagcagagccaaagggagagg 636

                                                                       
Query: 305 ctgatcatcaaagctggagatgccaatgctctctcagtatctgattggagcaagttggca 364
           |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 635 ctgatcatcaaagctggagatgccaatgctctctcagtatctga-tggaacaagttggca 577

                                                                       
Query: 365 agccaggaaggcacgcaatctaacaacacaacacgagtcaacttctgctggctatgcaca 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 agccaggaaggcacgcaatctaacaacacaacacgagtcaacttctgctggctatgcaca 517

                                                                       
Query: 425 tggcttaatgtgagaacatggcccgggtttgatccccagtaccacaaaactacacacaag 484
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 516 tggcttaatgtgagaacatggcccgggttcgatccccagtaccacaaaactacacacaag 457

                                                                       
Query: 485 ggaggagtaaaaattctcttcatgagcacagagttcccccagaaaaaaaaatgacaaaat 544
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 456 ggaggagtaaaaattctcttcatgagcacagagttcccccag-aaaaaaaatgacaaaat 398

                                                                       
Query: 545 ggacccataaagtgagtttaaataaatccaaaaggctgagctctaacagagcatgctcag 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ggacccataaagtgagtttaaataaatccaaaaggctgagctctaacagagcatgctcag 338

                                         
Query: 605 taatcacaatggaattaaactggaaacgta 634
           ||||||||||||||||||||||||||||||
Sbjct: 337 taatcacaatggaattaaactggaaacgta 308


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1032
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1022
Effective search space:   637728
Effective search space used:   637728
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)