Query= MSMg01no358_a04.b1 MSMg01no358_a04.b1 CHROMAT_FILE:
MSMg01no358_a04.b1 PHD_FILE: MSMg01no358_a04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:10 2005
(582 letters)
>mm_chr12_84142747_84143728
Length = 982
Score = 963 bits (498), Expect = 0.0
Identities = 533/552 (96%), Gaps = 12/552 (2%)
Strand = Plus / Minus
Query: 5 gaattcaagactagcctattctacagaatgggttctaggacaatcaaggttacacagaga 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 gaattcaagactagcctgttctacagaatgggttctaggacaatcaaggttacacagaga 493
Query: 65 aagaaaccttgtctcgaa------------aaacaaacaaacaaacaaacaaacaaaccg 112
|||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 492 aagaaaccgtgtctcgaaaaacaaacaaacaaacaaacaaacaaacaaacaaacaaacca 433
Query: 113 gccttatagaccaaagtagatggaagtaaaagggactcggagtagcttctcctgttttgg 172
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 432 gccttatagaccaaagtagatggaagtaaaagggactcggagtagcttcttctgttttgg 373
Query: 173 aaaaccggatatcagtgaacaaagacaggtgttgctgggctaggactttgttgttgatac 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 aaaaccggatatcagtgaacaaagacaggtgttgctgggctaggactttgttgttgatac 313
Query: 233 ttgttttgaggcagggtctcctgtagcccaggctggcctgtaactgggatgaccaaactc 292
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ttgttttgagacagggtctcctgtagcccaggctggcctgtaactgggatgaccaaactc 253
Query: 293 ctgggggctgggattactgcagctatcacatccagtttatgcagtgctggggggtcaaac 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ctgggggctgggattactgcagctatcacatccagtttatgcagtgctggggggtcaaac 193
Query: 353 ttggggcttcaaggatgttaggtgagcatcctaccaactggacctcatctctagactcag 412
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 192 ttggggcttcaaggatgttaggtgagcatcctaccaactggacctcatctccagactcag 133
Query: 413 ttttgctttgacaggtcagtaaagggcatctcagtcatgatactggatcgctgcctttga 472
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 ttttgccttgacaggtcagtaaagggcatctcagtcatgatactggatcgctgcctttga 73
Query: 473 acttgccacacactctggccatctgttgtctctggaactacaagtggacttcaatagaca 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 acttgccacacactctggccatctgttgtctctggaactacaagtggacttcaatagaca 13
Query: 533 ccacggggatgt 544
||||||||||||
Sbjct: 12 ccacggggatgt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 982
Length adjustment: 10
Effective length of query: 572
Effective length of database: 972
Effective search space: 555984
Effective search space used: 555984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no358_a04.g1 MSMg01no358_a04.g1 CHROMAT_FILE:
MSMg01no358_a04.g1 PHD_FILE: MSMg01no358_a04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:10 2005
(460 letters)
>mm_chr12_83972150_83973009
Length = 860
Score = 833 bits (431), Expect = 0.0
Identities = 431/431 (100%)
Strand = Plus / Plus
Query: 1 ctaggtaatgccttgaggatatagcatggctaatgaagctaaagactcatggttcgctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaggtaatgccttgaggatatagcatggctaatgaagctaaagactcatggttcgctgt 260
Query: 61 ggagccttttacttccaatgataactgaacctaatcaaagatactccagcccagctgagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggagccttttacttccaatgataactgaacctaatcaaagatactccagcccagctgagc 320
Query: 121 tctctgaattgcctgttagccaccagcagagtcatgagagaggagggtaatgggacaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctctgaattgcctgttagccaccagcagagtcatgagagaggagggtaatgggacaatt 380
Query: 181 ggaggcagattatgtttgatttgtgaagcctggcagcaatgtgtttgtcagcgggagttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaggcagattatgtttgatttgtgaagcctggcagcaatgtgtttgtcagcgggagttg 440
Query: 241 tggagagatgtcacaggtagctggatacatttgggatttctcgaaatttggcaagcgtgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggagagatgtcacaggtagctggatacatttgggatttctcgaaatttggcaagcgtgt 500
Query: 301 tgcatctggaatctttccagtgaaacttaagagactgagtaaatgattacggttccatgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgcatctggaatctttccagtgaaacttaagagactgagtaaatgattacggttccatgt 560
Query: 361 acctgttttctgtggcatctcccccatctaagctcaatcaaagttggtttcctggtcctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acctgttttctgtggcatctcccccatctaagctcaatcaaagttggtttcctggtcctc 620
Query: 421 tggttaccagt 431
|||||||||||
Sbjct: 621 tggttaccagt 631
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 860
Length adjustment: 10
Effective length of query: 450
Effective length of database: 850
Effective search space: 382500
Effective search space used: 382500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
