Query= MSMg01no358_m22.b1 MSMg01no358_m22.b1 CHROMAT_FILE:
MSMg01no358_m22.b1 PHD_FILE: MSMg01no358_m22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:10 2005
(445 letters)
>mm_chr12_32525839_32526683
Length = 845
Score = 839 bits (434), Expect = 0.0
Identities = 440/442 (99%)
Strand = Plus / Minus
Query: 4 ggaattccatatattatcgtgttttggcagacaagaaccttccagtatttagggaagtac 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 ggaattccatatattaacgtgttttggcagacaagaaccttccagtatttagggaagtac 586
Query: 64 aggcaagatctggagagccacttgctgtacacttcagggtgtgttcaaaaccatcctgtc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 aggcaagatctggagagccacttgctgtacacttcagggtgtgttcaaaaccatcctgtc 526
Query: 124 tgaatgcgtgctcagtaaattcaaatttctactttgattttatttcaccatttcaaccat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 tgaatgcgtgctcagtaaattcaaatttctactttgattttatttcaccatttcaaccat 466
Query: 184 gaattaactgctgtcacttttcaaccttgtgaattagagttttatattttaaactataaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 gaattaactgctgtcacttttcaaccttgtgaattagagttttatattttaaactataaa 406
Query: 244 aagaatccttttttaaggagtggctttcatctcaaatctcctattaacatttccatttat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 aagaatccttttttaaggagtggctttcatctcaaatctcctattaacatttccatttat 346
Query: 304 acccagaattgtttattctactttaaaacatttccaacctttcttcaaccaaaaactttg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 acccagaattgtttattctactttaaaacatttccaacctttcttcaaccaaaaactttg 286
Query: 364 tattttcctctgactgctttagtgaaactgttctgaaaagccttgagggaactgaagaag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tattttcctctgactgctttagtgaaactgttctgaaaagccttgagggaactgaagaag 226
Query: 424 gaaaggcacgggagcacaggag 445
|||||||| |||||||||||||
Sbjct: 225 gaaaggcatgggagcacaggag 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no358_m22.g1 MSMg01no358_m22.g1 CHROMAT_FILE:
MSMg01no358_m22.g1 PHD_FILE: MSMg01no358_m22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:10 2005
(358 letters)
>mm_chr12_32296748_32297506
Length = 759
Score = 617 bits (319), Expect = 0.0
Identities = 352/367 (95%), Gaps = 9/367 (2%)
Strand = Plus / Plus
Query: 1 ttaaaatttggtgattaattttcgtttgttcataataaatgtactgcttctataatttct 60
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 193 ttaaaatttggtgattaatttttatttgttcataataaatgtactgcttctataatttct 252
Query: 61 ggg---ttttttttgttgttg-----ttgttttgttttttgagacagggtttctctgtgt 112
||| ||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 253 ggggttttttttttgttgttgttgttttgttttgtttttttagacagggtttctctgtgt 312
Query: 113 agcactggctgtcctaaactctcactctgtagaccaggctggccttgaactcagaaatct 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 agcactggctgtcctaaactctcactctgtagaccaggctggccttgaactcagaaatct 372
Query: 173 gcctgcctctgtctcccaagtgctaggattaaaggcgtgtgccaccactgcctggcacta 232
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 373 gcctgcctctgtctcccaagtgctaggattaaaggcgtgtgccaccactgcctagcactg 432
Query: 233 taatctaatttctaataaaaaattttggtgataaaaaaa-ttaaaaaggaaagggaaagg 291
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 433 taatctaatttctaataaaaaattttggtgataaaaaaaattaaaaaggaaagggaaagg 492
Query: 292 agtaggaaaaaggatcagggactgtgcctcaattcttgtttgtctctgagacagtctcta 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 agtaggaaaaaggatcagggactgtgcctcaattcttgtttgtctctgagacagtctcta 552
Query: 352 atagccc 358
|| ||||
Sbjct: 553 attgccc 559
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 358
Length of database: 759
Length adjustment: 9
Effective length of query: 349
Effective length of database: 750
Effective search space: 261750
Effective search space used: 261750
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
