Query= MSMg01no359_c02.b1 MSMg01no359_c02.b1 CHROMAT_FILE:
MSMg01no359_c02.b1 PHD_FILE: MSMg01no359_c02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:34 2005
(423 letters)
>mm_chr12_81496110_81496933
Length = 824
Score = 804 bits (416), Expect = 0.0
Identities = 419/420 (99%), Gaps = 1/420 (0%)
Strand = Plus / Minus
Query: 5 gaattctctccctctaccatatgggtctcggatcaaattatgtccagtttataggctgtg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gaattctctccctctaccatatgggtctcggatcaaattatgtccagtttataggctgtg 565
Query: 65 ggaggatccgaggggtctaaagggctgctgggcacctagaggtataactccttacgatca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ggaggatccgaggggtctaaagggctgctgggcacctagaggtataactccttacgatca 505
Query: 125 tgaggaggccttcccactgagtacctgtccttctggcacagtttatggatactgagctat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgaggaggccttcccactgagtacctgtccttctggcacagtttatggatactgagctat 445
Query: 185 tgagcagcttcttttgccttctcctaaaccacactgctccagttcagcttgaagcctgtg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgagcagcttcttttgccttctcctaaaccacactgctccagttcagcttgaagcctgtg 385
Query: 245 ggtgtgccgcacagtcatgctgtcccactgctgccctgaaataaaccatgagagggctgg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggtgtgccgcacagtcatgctgtcccactgctgccctgaaataaaccatgagagggctgg 325
Query: 305 ttggcaggataaaatgttaacggtgggaaggacttgagttagcatctgctctga-ccccc 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 324 ttggcaggataaaatgttaacggtgggaaggacttgagttagcatctgctctgacccccc 265
Query: 364 agagggaactgtaagggaagacactgacagtgtgcgttcttccagtgcaatctgaagtct 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agagggaactgtaagggaagacactgacagtgtgcgttcttccagtgcaatctgaagtct 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 824
Length adjustment: 9
Effective length of query: 414
Effective length of database: 815
Effective search space: 337410
Effective search space used: 337410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no359_c02.g1 MSMg01no359_c02.g1 CHROMAT_FILE:
MSMg01no359_c02.g1 PHD_FILE: MSMg01no359_c02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:34 2005
(458 letters)
>mm_chr12_81341778_81342632
Length = 855
Score = 832 bits (430), Expect = 0.0
Identities = 450/458 (98%), Gaps = 3/458 (0%)
Strand = Plus / Plus
Query: 1 caggactgcacagagaggtaaaagatgggctgaggatatggctcagcagataaagatgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 caggactgcacagagaggtaaaagatgggctgaggatatggctcagcaggtaaagatgtt 260
Query: 61 tgctaccaatctcaaagacctgagttcaatccccaggacccacagtgtaaagtgagaacc 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 tgctaccaatctcaaagacctgagttcaatcctcaggacccacagtgtaaagtgagaacc 320
Query: 121 aactcctgcaagttgccctctgaccttgtaccatgtcacatgtaccatgtcacaaacaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aactcctgcaagttgccctctgaccttgtaccatgtcacatgtaccatgtcacaaacaaa 380
Query: 181 agaaacaatgttaagttaaaataaagaagtaaataatccacagcaaatgtggttcagcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agaaacaatgttaagttaaaataaagaagtaaataatccacagcaaatgtggttcagcag 440
Query: 241 aggaacacagaggtacagctggctcgagtgctctcatcgctaacataggagtgtaagaac 300
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggaact---aggtacagctggctcgagtgctctcatcgctaacataggagtgtaagaac 497
Query: 301 tgcatgtacctgctacccgcctacttcatacactgtcgtggcaccagtcagtgatgtatg 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tgcatgtacctgctacccgcccacttcatacactgtcgtggcaccagtcagtgatgtatg 557
Query: 361 ctgttagttcaaacccattgataactgcctgtacaaggaaaggatggatgctcatttgta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ctgttagttcaaacccattgataactgcctgtacaaggaaaggatggatgctcatttgta 617
Query: 421 ctaagatgatagctcctctctttagcctttctactcca 458
||||||||| ||||||||||||||||||||||||||||
Sbjct: 618 ctaagatgacagctcctctctttagcctttctactcca 655
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 855
Length adjustment: 10
Effective length of query: 448
Effective length of database: 845
Effective search space: 378560
Effective search space used: 378560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
