Query= MSMg01no361_g01.b1 MSMg01no361_g01.b1 CHROMAT_FILE:
MSMg01no361_g01.b1 PHD_FILE: MSMg01no361_g01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:24 2005
(421 letters)
>mm_chr12_36346920_36347740
Length = 821
Score = 750 bits (388), Expect = 0.0
Identities = 408/418 (97%), Gaps = 6/418 (1%)
Strand = Plus / Minus
Query: 4 ggaattccttaactctcttaaatttctcagcatagatctttgaatattgaaatgacagat 63
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 721 ggaattccttaactctcttaaatttctcagcatatatctttgaatattgaaatgacagat 662
Query: 64 tatgaactcaattgaaggattttggaaatatgatcatgttatttcaaaacacttaaatta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tatgaactcaattgaaggattttggaaatatgatcatgttatttcaaaacacttaaatta 602
Query: 124 tttagggggatgtctttgttattaattattattattataatttctggtacccatttcact 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tttagggggatgtctttgttattaattattattattataatttctggtacccatttcact 542
Query: 184 tatattgatatttatgggttgcggaaaaggtaggtggttacattatcctttgttcttgcc 243
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 541 tatattgatatttatgggttgcggaaaaggtagttggttacattatcctttgttcttgcc 482
Query: 244 ttgcaaaattcccaaaagccagtcaacataaatttcattaactttccctatgtaaagcag 303
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 481 ttgcaaaattcccaaaagccagtcaacataaatttcattaactttccccatgtaaagcag 422
Query: 304 aaaaaaagtcaagttaaaggaatgaaaattgtcgcaagagtgtacatttgaactggtgtg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaaaaaagtcaagttaaaggaatgaaaattgtcgcaagagtgtacatttgaactggtgtg 362
Query: 364 tgtgtgtgtgtgtatgtgtgtgtgcacatgcacacgtgtgctggtgaaagtgcatgga 421
||| ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgtatgtgtgtgt------gtgtgcacatgcacacgtgtgctggtgaaagtgcatgga 310
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 821
Length adjustment: 9
Effective length of query: 412
Effective length of database: 812
Effective search space: 334544
Effective search space used: 334544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no361_g01.g1 MSMg01no361_g01.g1 CHROMAT_FILE:
MSMg01no361_g01.g1 PHD_FILE: MSMg01no361_g01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:24 2005
(538 letters)
>mm_chr12_36174714_36175657
Length = 944
Score = 949 bits (491), Expect = 0.0
Identities = 528/543 (97%), Gaps = 6/543 (1%)
Strand = Plus / Plus
Query: 2 ttttttgctgaagacagaacacacaccagtgagtccctgttgcctatgaaatgtatcccc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ttttttgctgaagacagaacacacaccagtgagtccctgttgcctatgaaatgtatcccc 261
Query: 62 aacattcaatgtgccagctgcagctgggtgcccggcatggaagagctcagtagaaatgca 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aacattcaatgtgccagctgcagctgggtgcccggcatggaagagctcagtagaaatgca 321
Query: 122 aactctagggacccgtggcagttgctgagttagtctagatgacaacaggctcccatgggg 181
| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 agctctagggacttgtggcagttgctgagttagtctagatgacaacaggctcccatgggg 381
Query: 182 gtcttgagaaagatcaagaagctttgttggcacttcttgttcctggcaataaggacctca 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gtcttgagaaagatcaagaagctttgttggcacttcttgttcctggcaataaggacctca 441
Query: 242 tttttatgcgggcatttgtgagagtcaccatgttgtgctaagaaagctggtttacctctt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tttttatgcgggcatttgtgagagtcaccatgttgtgctaagaaagctggtttacctctt 501
Query: 302 gaaaaaaa--tcagaattctcaaaaaagcaaaacaaaca----gtaggatgagatgattg 355
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 502 gaaaaaaaaatcagaattctcaaaaaagcaaaacaaacaaacagtaggatgagatgattg 561
Query: 356 ctaagttctttcctagagccttgggacttttgctctgttaacccctgagtgtcggagttg 415
||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 562 ctaagttctttcctagagccttgggacttttcctctgttaaccgctgagggtcggagttg 621
Query: 416 tcctagtgaatatcactgtgagaagcaaatggtctctggccagtagatatattaatcaac 475
||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 622 tcctagtaaatatcactgtgagaagcaaatggtctctagccagtagatatattaatcaat 681
Query: 476 gtagactaatcacatttgctagctaatctatgtcaatttgtcatttaattcttttgtaat 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gtagactaatcacatttgctagctaatctatgtcaatttgtcatttaattcttttgtaat 741
Query: 536 cca 538
|||
Sbjct: 742 cca 744
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 944
Length adjustment: 10
Effective length of query: 528
Effective length of database: 934
Effective search space: 493152
Effective search space used: 493152
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
