NCCCCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCAGTTAATAACCTCATTATTTTACTCCCTTTCTTTAAAAAGTG
TCTCCTATCTAGTTGAATATTGATTGCATGGATGATTACGTAAATAAAAG
AGTGAGGGAATGAGATCCAACTGAAGAGATTGAATAGAATTAGAAGGTGA
CTTTGGAGATAGAGTACTTTAGTAAATAAGTGATCAAATAGGGTTTGAAG
GTTTCATTCCTCAGGAAGAAAACCATCTTCAAAATAATTGTAATCCCAAT
ATTATAAAGAATATCAAAGCAGAACAAAGTTCAAGTGATGAAAATTTATT
GCCTCTTAGAAACTGTACCATGTATTTAACTTGTGTTCTAAGATATTCAA
CCCAGAATTTTAAAAGCACCTAGATTCTAAGGAGATTTCAATGTTCCCAA
TTTCCATGACATATATGTCTCCCATAGGCATAGCTACCTGAAGAAAAACA
TATCTTTGCTGCAGCAGAAAAGACAAATTTGAATAAGTATGTGAGGAAAA
TATTTTGAGATGTAGGCAGATGGAAACTTCTTTCTTGATATTTCCATTGA
TCCCATATGGCAGGAGCATCAGGTATTTTTTCCAACAGTCTGCCTCAGGT
TTTTCTACCCCTCGAGGTTAAACTTTTCTGGATGACAGAGCAGAATGAAC
TGGAAGTGTGAACATGATAAGCTTGCATGTCTC

NCCTTTTCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTGTGTATCTCTGTACC
TCATTTTGTTTTCACTTGGGTTATTTGGTTTGTTGTTGTCTAACTTCTTG
AGTACTTTATAAGTTTTGCCTTTTAGCCCTCTGTCAGATATAGGGATGGT
GACAGTTTTGTACTAATGACAGTGTCCTTTGCAGAAGCTTTCAGTTTTAT
GAGGTACCATTTATCAATCATTGGTGTATTAATTGTTGATAAATTAATAC
ATTGACAAATGTTGATGAATAGAGCACAAGATATTGTTGTTCTGTTCAGA
AATTTGTCTCCTCTACCAATGAATGTAAGATTATTTCCCACCACTGGGGC
AGTGGTAGTGGAGCTCCACTATCTCAGAGAAGAAGAGAAGTGGACACGGG
AGGAGGAACTGTCGGGGAGCAAGAGGGTACAGTGACAAGTATGTAAAGTG
AATAAAGAAAAAAAAAAGATAACCAAAGACTGGTCGGCAACTTATATTCC
TTCTCCTCTTTCTCTTTTTTCCTAGACCCAATCTCTTAGTCTCATCCCTA
GTGCTGCAATGGATCATCAACTATATCCTTCCTTCCCTGTGTCCATATCT
CCTGTGTATATCACAGACCATCCCTTCCTTACATCCATCCCTCACACATC
ACTATACCATCCCACAATTTCATCAGATACCTCCGTCTAAAN

Query= MSMg01no361_l11.b1 MSMg01no361_l11.b1 CHROMAT_FILE:
MSMg01no361_l11.b1 PHD_FILE: MSMg01no361_l11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:50 2005
         (660 letters)



>mm_chr12_44426828_44427888
          Length = 1061

 Score = 1178 bits (609), Expect = 0.0
 Identities = 648/661 (98%), Gaps = 1/661 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcattattttactccctttctttaa-aaagtgtctcctatctagttgaatattgattgca 59
           ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 861 tcattattttactccctttctttaacaaagtgtctcctatgtagttgaatattgattgca 802

                                                                       
Query: 60  tggatgattacgtaaataaaagagtgagggaatgagatccaactgaagagattgaataga 119
           |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 801 tggatgattatgtaaataaaagagtgagggaatgagatccaactgaaaagattgaataga 742

                                                                       
Query: 120 attagaaggtgactttggagatagagtactttagtaaataagtgatcaaatagggtttga 179
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 attagaatgtgactttggagatagagtactttagtaaataagtgatcaaatagggtttga 682

                                                                       
Query: 180 aggtttcattcctcaggaagaaaaccatcttcaaaataattgtaatcccaatattataaa 239
           |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 681 aggtttaattcctcaggaagaaaatcatcttcaaaataattgtaatcccaatattataca 622

                                                                       
Query: 240 gaatatcaaagcagaacaaagttcaagtgatgaaaatttattgcctcttagaaactgtac 299
           ||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 621 gaatatcaaagcagaacaaggttcaggtgataaaaatttattgcctcttagaaactgtac 562

                                                                       
Query: 300 catgtatttaacttgtgttctaagatattcaacccagaattttaaaagcacctagattct 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catgtatttaacttgtgttctaagatattcaacccagaattttaaaagcacctagattct 502

                                                                       
Query: 360 aaggagatttcaatgttcccaatttccatgacatatatgtctcccataggcatagctacc 419
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 501 aaggagatttcaatgttcccaatttccatgacatatttgtctcccataggcatagctacc 442

                                                                       
Query: 420 tgaagaaaaacatatctttgctgcagcagaaaagacaaatttgaataagtatgtgaggaa 479
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgaagaaaaatatatctttgctgcagcagaaaagacaaatttgaataagtatgtgaggaa 382

                                                                       
Query: 480 aatattttgagatgtaggcagatggaaacttctttcttgatatttccattgatcccatat 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatattttgagatgtaggcagatggaaacttctttcttgatatttccattgatcccatat 322

                                                                       
Query: 540 ggcaggagcatcaggtattttttccaacagtctgcctcaggtttttctacccctcgaggt 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcaggagcatcaggtattttttccaacagtctgcctcaggtttttctacccctcgaggt 262

                                                                       
Query: 600 taaacttttctggatgacagagcagaatgaactggaagtgtgaacatgataagcttgcat 659
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaacttttctggatgacagagcagaatgaactggaagtgtgaacatgataagcttgcat 202

            
Query: 660 g 660
           |
Sbjct: 201 g 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1061
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1051
Effective search space:   683150
Effective search space used:   683150
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)