ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTCAGAATTCCTAAAAAATCACAAGAGCATCTGTCCCCATTAGATGACC
CAGCATCTAGATTTCCTAAACATTAAACCACATGCAATATGCAGGGGATG
GGGGTTGATTGTTATAATGAAATCTGAGTGTCCTGATAAAAGGGAGAGTG
GGGAGACAAACAGGACCAGAGAGTGCAAACATTTCCCACTGAGCTCTTCC
AAACATGAAGCAGCCCTAGGTTCCCAGGCACCACAGGACCATCTGGTTGG
GGGAAAGCAACAGTTTTTATTCATTTTTTCAAATGTGGGTCATCTTTTAA
AGTTATAGTTGTTTACATTCAAAATACAGCATGTGTCTATATCAGAATTA
TTAAGCAATTACTCTACAGAATAGTTTTAATTTTTTTTTATTTTCTAAAG
TCTCACAGGATCAATGCCAATAAAGACATTTTAATCACAGCAAAAAGGAA
TGGGGAGATGGAAAAAGAATTAATAGGAAAAAGGATAAAAAAAGCTCGTG
TAAACTACAGAGACCATTATATACTTAGTGAGAGAAACACTTTTAGTTTT
CAGTCCATCTTTGGATCTAAAGGAAATTACCAACATCTATTTTTCTTTTC
TTGCTAAATGATTGTGCCTTACATGTGTCACATAAAAATTTTTAAAATGG
CGGTTGGACATATTTACAAAATTACTCG

NNCCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGG
CAGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATG
CAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGTCTAA
GATCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAG
GAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGG
AAATCCGTCTGGCGGTTCCTCTGAAAATTGGACATAGTACTACCGGAGGA
TCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACGGGTA
AGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCC
AGAAGCTGGAAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACAGAA
AATGTGGTACATCTAAACAATGGAGTACTACTCAGCTATTAAAAAGAATG
AATTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTG
AGTGAGGTAACACATTCACAAAGGAACTCACACAATATGTACTCACTGAT
AAGTGGATATTAGCCCAAACCTAGGATACCCAGATATAAGAAACTATTCC
CTAAAACATGAAACTCCAAAAAATGGAAACTTGAGGGGGGACCTATGCCC
CCCTG

Query= MSMg01no363_h09.b1 MSMg01no363_h09.b1 CHROMAT_FILE:
MSMg01no363_h09.b1 PHD_FILE: MSMg01no363_h09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:11 2005
         (531 letters)



>mm_chr12_14277691_14278621
          Length = 931

 Score = 1004 bits (519), Expect = 0.0
 Identities = 528/531 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   acaagagcatctgtccccattagatgacccagcatctagatttcctaaacattaaaccac 60
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 acaagagcatctgtcctcattagatgacccagcatctagatttcctaaacattaaaccac 672

                                                                       
Query: 61  atgcaatatgcaggggatgggggttgattgttataatgaaatctgagtgtcctgataaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 atgcaatatgcaggggatgggggttgattgttataatgaaatctgagtgtcctgataaaa 612

                                                                       
Query: 121 gggagagtggggagacaaacaggaccagagagtgcaaacatttcccactgagctcttcca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gggagagtggggagacaaacaggaccagagagtgcaaacatttcccactgagctcttcca 552

                                                                       
Query: 181 aacatgaagcagccctaggttcccaggcaccacaggaccatctggttgggggaaagcaac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 aacatgaagcagccctaggttcccaggcaccacaggaccatctggttgggggaaagcaac 492

                                                                       
Query: 241 agtttttattcattttttcaaatgtgggtcatcttttaaagttatagttgtttacattca 300
           ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 agtttttaaacattttttcaaatgtgggtcatcttttaaagttatagttgtttacattca 432

                                                                       
Query: 301 aaatacagcatgtgtctatatcagaattattaagcaattactctacagaatagttttaat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 aaatacagcatgtgtctatatcagaattattaagcaattactctacagaatagttttaat 372

                                                                       
Query: 361 ttttttttattttctaaagtctcacaggatcaatgccaataaagacattttaatcacagc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ttttttttattttctaaagtctcacaggatcaatgccaataaagacattttaatcacagc 312

                                                                       
Query: 421 aaaaaggaatggggagatggaaaaagaattaataggaaaaaggataaaaaaagctcgtgt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 aaaaaggaatggggagatggaaaaagaattaataggaaaaaggataaaaaaagctcgtgt 252

                                                              
Query: 481 aaactacagagaccattatatacttagtgagagaaacacttttagttttca 531
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 aaactacagagaccattatatacttagtgagagaaacacttttagttttca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 931
Length adjustment: 10
Effective length of query: 521
Effective length of database: 921
Effective search space:   479841
Effective search space used:   479841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)