TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CCTCGGTTTTGAGTTGATTTCAGGCTCACAGGTCTATATCAGTTGTCTGT
GTCCCAGTTTAACTCATTAGATGGTTTAACTTGTTAGAGGTAAGGTAGCA
TTGACAAAATTAGTTAGATTTAAAAACGAGCACTTAATAGGATTACTTGC
TTCCTTTATTTTATTTTTAATAAAGGCATTACATGAATTAGATTTTTTAT
TTATCTAGTTATATTTTTTGAATTTACATCATTTTTATGTCTCCTTCCCC
CTTCAACTCCTCTTGGGTTCCACATGTCTAAGGCTGACACTTGGTGAGGT
GTTTGTGAGCATCGAGTCTGCCATATTTCCAGGATCTGAATCTTCTTAAA
TTTTCTGTATTTCCATATTTTATCCTAAAAACTTGCTTTATTTTTATACT
AGCTTTAAACTGGTATTTTTCCCCCAAATAGATATAGGGCTCATTTTGAA
TGGCATATGAGCCATGATCATAGTAACTTAACCTATATGCTTAACCTTCC
CTTACAAATTACCTTACTTGTATGGAAAATGCCCTAATTCAATCCCATGG
TGTCACTCAAGGCTATCCCTTAGGTTCCGGTTTCTCTAAACCCTTTCCAC
TCCCCCATTTTTAAACAGTTCCATCGTTCTCCCGGTTTCCGTGATTGCCT
CCTCTTCGTTCAATCTCCCCCTTTTTTAA

AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXACTGACGCGGGTAGAAAGGCCAGCTG
GGATGCCCCCAAAGTTTGGGGACTAAGACTCTATCGATCCACAGGGGCCG
ACCCGGTGACCCGGTTCTCTTTGACTCGCCAGGTCCTCAATGTAGGACCC
CGCGTCCCCATTGGGCCTAATCCCGTGATCACTGACCAGCTACCCCCATC
CCAACCCGTGCAGATCATGCTCCCCAGGCCTCCTCATCCTCCTCCTTCAG
GCACGGTCTCTATGGTACCTGGGGCTCCCCCGCCTTCTCAACAACCTGGG
ACGGGAGACAGGCTGCTAAATCTGGTAGAAGGAGCCTACCAAGCACTCAA
CCTCACCAGTCCTGACAAAACCCAAGAGTGCTGGTTGTGTCTGGTATCGG
GACCCCCCTACTACGAAGGGGTTGCCGTCCTAGGTACCTACTCCAACCAT
ACCTCTGCCCCAGCTAACTGCTCCGTGGCCTCCCAACACAAGCTGACCCT
GTCCGAAGTAACCGGACAGGGACTCTGCGTAGGAGCAGTTCCCAAAACCC
ATCAAGCCCTGTGTAATACCACCCAGAAGACGAGCGACGGGTCTCACTAT
CTGGCTGGTCCCGCCGGGAACATCCGGGTTTTGTAACCGGGGTTCACTTC
CTGGCAATCTAACATGGTATTCAACCTCACTCCGATTACCGGGTTCTGGT
TTA

Query= MSMg01no365_n04.b1 MSMg01no365_n04.b1 CHROMAT_FILE:
MSMg01no365_n04.b1 PHD_FILE: MSMg01no365_n04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:25 2005
         (448 letters)



>mm_chr12_79005918_79006766
          Length = 849

 Score =  814 bits (421), Expect = 0.0
 Identities = 439/445 (98%), Gaps = 1/445 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcctcggttttgagttgatttcaggctcacaggtctatatcagttgtctgtgtccc 64
           |||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 gaattcctcgggcatgagttgatttcaggctcacaggtctatatcagttgtctgtgtccc 590

                                                                       
Query: 65  agtttaactcattagatggtttaacttgttagaggtaaggtagcattgacaaaattagtt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 agtttaactcattagatggtttaacttgttagaggtaaggtagcattgacaaaattagtt 530

                                                                       
Query: 125 agatttaaaaacgagcacttaataggattacttgcttcctttattttatttttaataaag 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 agatttaaaaacgagcacttaataggattacttgcttcctttattttatttttaataaag 470

                                                                       
Query: 185 gcattacatgaattagattttttatttatctagttata-ttttttgaatttacatcattt 243
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 469 gcattacatgaattagattttttatttatctagttatatttttttgaatttacatcattt 410

                                                                       
Query: 244 ttatgtctccttcccccttcaactcctcttgggttccacatgtctaaggctgacacttgg 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ttatgtctccttcccccttcaactcctcttgggttccacatgtctaaggctgacacttgg 350

                                                                       
Query: 304 tgaggtgtttgtgagcatcgagtctgccatatttccaggatctgaatcttcttaaatttt 363
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 tgaggtgtttgtgagcatcaagtctgccatatttccaggatctgaatcttcttaaatttt 290

                                                                       
Query: 364 ctgtatttccatattttatcctaaaaacttgctttatttttatactagctttaaactggt 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ctgtatttccatattttatcctaaaaacttgctttatttttatactagctttaaactggt 230

                                    
Query: 424 atttttcccccaaatagatataggg 448
           ||||| |||||||||||||||||||
Sbjct: 229 attttccccccaaatagatataggg 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 849
Length adjustment: 10
Effective length of query: 438
Effective length of database: 839
Effective search space:   367482
Effective search space used:   367482
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)