Query= MSMg01no368_l24.b1 MSMg01no368_l24.b1 CHROMAT_FILE:
MSMg01no368_l24.b1 PHD_FILE: MSMg01no368_l24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:17 2005
(429 letters)
>mm_chr12_108789620_108790448
Length = 829
Score = 791 bits (409), Expect = 0.0
Identities = 424/429 (98%)
Strand = Plus / Plus
Query: 1 aaaggtgtttggggcgcagggtgatggtatgggagcgtacactttggacagtagagaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaggtgtttggggcgcagggtgatggtatgggagcgtacactttggacagtagagaggg 260
Query: 61 ctgagcctggagctgacattccagcagtaacactggaagaagaaaccccaaggcctttag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgagcctggagctgacattccagcagtaacactggaagaagaaaccccaaggcctttag 320
Query: 121 gtccaggcctcccagggtttccagtttaccaagcacaaaggccctggagtggaagcaagc 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtccaggcctcctagggtttccagtttaccaagcacaaaggccctggagtggaagcaagc 380
Query: 181 tggcacacttgaaggatgagcaaactgaatcctgaaagactgagatggttaaggatggtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggcacacttgaaggatgagcaaactgaatcctgaaagactgagatggttaaggatggtg 440
Query: 241 atgaggctcagttaccaccaaagacggcaggctgctaagaccgggtcttcacgcctgctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgaggctcagttaccaccaaagacggcaggctgctaagaccgggtcttcacgcctgctt 500
Query: 301 tggggcctggaggctataaaccaggtaagatacaacatgggctctcaaagtcagggcagg 360
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tggggcctggaggctataagccaggtaagatacaacatgggctctcaaagtcagggcagt 560
Query: 361 ggggtaaagtgaatattgatgttggacaggacagatcctgagatctcagctgtgttactg 420
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 561 ggggtaaagtgagtattgatgttggacaggacagatcctgagatctcaactgtgttactg 620
Query: 421 tgatactgt 429
|||||||||
Sbjct: 621 tgatactgt 629
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 829
Length adjustment: 9
Effective length of query: 420
Effective length of database: 820
Effective search space: 344400
Effective search space used: 344400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no368_l24.g1 MSMg01no368_l24.g1 CHROMAT_FILE:
MSMg01no368_l24.g1 PHD_FILE: MSMg01no368_l24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:17 2005
(302 letters)
>mm_chr12_108974793_108975493
Length = 701
Score = 561 bits (290), Expect = e-164
Identities = 299/302 (99%), Gaps = 1/302 (0%)
Strand = Plus / Minus
Query: 1 tggcaaggaagaccctagcactgagaacagacaataaatgagcaggccctggcatgctac 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 501 tggcaaggaagaccctagcactgagaacagacaataaatgagcaggccctggcacgctac 442
Query: 61 aacaatggagtggttcagcccttggccagtgctgaagtgttataggagacaggagagagg 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 aacaatggagtggttcagcccttggccagtgctgaagtg-tataggagacaggagagagg 383
Query: 121 gctccaccgcaggtccaatgtctcgggtgaggagagagaagacagcaattagatattgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gctccaccgcaggtccaatgtctcgggtgaggagagagaagacagcaattagatattgtg 323
Query: 181 gaactgacatcaggggcaccagatgcacggcagagacacagtgcaaggctaagggtgata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gaactgacatcaggggcaccagatgcacggcagagacacagtgcaaggctaagggtgata 263
Query: 241 aatcatcaagtaaggctgacgtgtgagagtcagaggtgacacagaaaggcacagatctca 300
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aatcatcaagtaaggctgatgtgtgagagtcagaggtgacacagaaaggcacagatctca 203
Query: 301 tg 302
||
Sbjct: 202 tg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 302
Length of database: 701
Length adjustment: 9
Effective length of query: 293
Effective length of database: 692
Effective search space: 202756
Effective search space used: 202756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
