Query= MSMg01no370_i10.b1 MSMg01no370_i10.b1 CHROMAT_FILE:
MSMg01no370_i10.b1 PHD_FILE: MSMg01no370_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:37 2005
(463 letters)
>mm_chr12_32034869_32035731
Length = 863
Score = 832 bits (430), Expect = 0.0
Identities = 451/458 (98%), Gaps = 2/458 (0%)
Strand = Plus / Plus
Query: 5 gaattcaggtatttaagtatttcaatgacattcatttcatctgtcattctgcttcctaac 64
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaggtatttaagtatttcaatgatattcatttcatctgtcattctgcttcctaac 264
Query: 65 aaatctacttaacagtctgtaatgacttataagatctataaagatgttcttaagccacca 124
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaatctacttaacagtctgtaatcacttataagatctataaagatgttcttaagccacca 324
Query: 125 actggactaggaaaatgtaccaacaatggagtggcctcacattctggaagtcccacaaat 184
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 325 actggactaggaaaatgtaccaacaacggagtggcctcacattctggaagtcccacaaat 384
Query: 185 tgcatcataatctcacactctctaagcagtgtgactaccatttcctaagaccagggccac 244
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 385 tgcatcataatctcacactctctaagcagtgtgactaccatttcctaaggccagggccac 444
Query: 245 ataaagaaagcacacttccagctcctatcacagcgagtaagcaatggacagcagcgacaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ataaagaaagcacacttccagctcctatcacagcgagtaagcaatggacagcagcgacaa 504
Query: 305 tatactctgatgcagcaaggtttttttacttgaagacaacttctgcacctgagatcaaga 364
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 505 tatactctgatgcagcaaggtttttt-acttgaagacaacttctgcacctgagatcaaga 563
Query: 365 tatgccaaccaaagaggaacaaagaactgtctgtactgagagacgtggctcaccttctcc 424
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 564 tatgccaaccaaagaggaacaaagaactgtctgtactgagagacgcggctcaccttctcc 623
Query: 425 ctaaaacagtgacattt-gcgtgttacattaactttta 461
||||||||||||||||| ||||||||||||||||||||
Sbjct: 624 ctaaaacagtgacattttgcgtgttacattaactttta 661
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 863
Length adjustment: 10
Effective length of query: 453
Effective length of database: 853
Effective search space: 386409
Effective search space used: 386409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no370_i10.g1 MSMg01no370_i10.g1 CHROMAT_FILE:
MSMg01no370_i10.g1 PHD_FILE: MSMg01no370_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:37 2005
(252 letters)
>mm_chr12_32213366_32214017
Length = 652
Score = 462 bits (239), Expect = e-135
Identities = 248/251 (98%)
Strand = Plus / Minus
Query: 1 caaacaagagtctgtgcaaggcttttaagcatttggggtaaactgctgaaaggcttttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 caaacaagagtctgtgcaaggcttttaagcatttggggtaaactgctgaaaggcttttgg 392
Query: 61 tattatcattgacaactaagtccgaggtgttttcttcgttagaacgggatcataagtgat 120
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tattattattgacaagtaagtccgaggtgttttcttcgttagaacgggatcataagtgat 332
Query: 121 gttggctcatcaaataatgccttcgagcctgatgaagatgtggaagagccagaggaactt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 attggctcatcaaataatgccttcgagcctgatgaagatgtggaagagccagaggaactt 272
Query: 181 aatatcccaaccaaagaaattgagattcaagtggactggaactccgaactcccggtgaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 aatatcccaaccaaagaaattgagattcaagtggactggaactccgaactcccggtgaaa 212
Query: 241 gtgaatgtccc 251
|||||||||||
Sbjct: 211 gtgaatgtccc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 252
Length of database: 652
Length adjustment: 9
Effective length of query: 243
Effective length of database: 643
Effective search space: 156249
Effective search space used: 156249
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
