Query= MSMg01no370_l21.b1 MSMg01no370_l21.b1 CHROMAT_FILE:
MSMg01no370_l21.b1 PHD_FILE: MSMg01no370_l21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:53 2005
(390 letters)
>mm_chr12_70364704_70365493
Length = 790
Score = 731 bits (378), Expect = 0.0
Identities = 384/386 (99%)
Strand = Plus / Plus
Query: 5 gaattcaaatgtagcctgtgctacattgaaaccttatctcaaaataaacagcaatatgat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaatgtagcctgtgctacattgaaaccttatctcaaaataaacagcaatatgat 264
Query: 65 atattcattaatgtgaatattttaaaatgctatttatttgatgtatattatagaataaat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atattcattaatgtgaatattttaaaatgctatttatttgatgtatattatagaataaat 324
Query: 125 actatagaaataagatgctactattaaagaaaaccaaatacttccataataatgttttcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 actatagaaataagatgctactattaaagaaaaccaaatacttccataataatgttttcc 384
Query: 185 aatttaattgactagtataatgaatatgtcctcataggaatttcagatacagtgtgccat 244
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 385 aatttaattgactagtataatgaatatgtcctcataggaatttcagatacagcgtgccat 444
Query: 245 agggccgtctgcacatggtacactgtctcctgccatatattttagaaatggccttgctcc 304
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 445 agggccgtctgcacatggtacactgtctcctgccatatattttagaaatgaccttgctcc 504
Query: 305 agactgtttgtgttagtgtaaagtcaacttaagatatatctttctgttgttaaatgacaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agactgtttgtgttagtgtaaagtcaacttaagatatatctttctgttgttaaatgacaa 564
Query: 365 ttgatagcttatttcagaaaaagacc 390
||||||||||||||||||||||||||
Sbjct: 565 ttgatagcttatttcagaaaaagacc 590
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 390
Length of database: 790
Length adjustment: 9
Effective length of query: 381
Effective length of database: 781
Effective search space: 297561
Effective search space used: 297561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no370_l21.g1 MSMg01no370_l21.g1 CHROMAT_FILE:
MSMg01no370_l21.g1 PHD_FILE: MSMg01no370_l21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:53 2005
(352 letters)
>mm_chr12_70538491_70539239
Length = 749
Score = 596 bits (308), Expect = e-175
Identities = 343/364 (94%), Gaps = 17/364 (4%)
Strand = Plus / Minus
Query: 1 accagtgtggggcttctacctctcactgttccattaa----acagacagacagacagaca 56
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 658 accagtgtggggcttctacctctcactgttccattaaacagacagacagacagacagaca 599
Query: 57 gacagacagacacacacacacacacacacacacacacaca----------ccgactccta 106
|||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 598 gacagacagacacacacacacacacacacacacacacacacacacacaccccgactccta 539
Query: 107 cccacactggcaccctacctccaatttaatgcccagtctgcagccagtaggcttctgagt 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 cccacactggcaccctacctccaatttaatgcccagtctgcagccagtaggcttctgagt 479
Query: 167 aagtccttggtctggaggagagagaggacaggtggtaacaggaacttacgataggtaatt 226
|||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||
Sbjct: 478 aagtccttggtctggaggagagaggggacaggtggtaacaggaacttacggtaggtaatt 419
Query: 227 ctctgagttagatgaccaccactctgagcagtgataagccaaacaggtcacagagtcagg 286
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 418 ctctgagttagatg---accactctgagcagtgataagccgaacaggtcacagagtcagg 362
Query: 287 gaagacaagacttaatggcacaaatagtttaatctgtggttatttttcattcagatattt 346
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 361 gaagacaagacttaatggcacaaatagtttaatttgtggttatttttcattcagatattt 302
Query: 347 ttta 350
||||
Sbjct: 301 ttta 298
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 352
Length of database: 749
Length adjustment: 9
Effective length of query: 343
Effective length of database: 740
Effective search space: 253820
Effective search space used: 253820
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
