TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CACTGCTATCCTTTCTTCAAGATCACAAATCTGTACTATACATTTCAATT
ACTGTTTTGAACAGCCTTTAGGAAATCCTGGGAACTGAAGAGGATGTGAT
ACATCACTTCCTTTGTTTATTCATCAAATGTAAAATTTTCTTTTTGTTAC
AGAGGTAAGTTACCAGATAGGAAAATGGAATTTTCTGAGTGTGTCTTTCC
AAAACTCAGACACTGAAATCCTAACTCCCAGATGGACACTTTGGGGCGGG
GGCGGGGGGGGTTTTAGGAAGGATTAGGACCTAATTAGCTCAGGAAGGTG
GAATGTCCATTAATTAGGACAAAACATTGGGGTAGGAATTCTGAGAAGAA
TTATCATCGTCTTTCTATCTTATAAGCACATAGCAAGAAAGTGGAAATAT
GCATTTCACAATTGGCATGCCTAAACAAGATTTTATCATAAGCCAATTTA
TGAGTACATATGATATGTTATAGTAGATAGAATTAATAAGACAGGAAGAC
TGACTTANATTTTTAGGAATTAGTTGAAAATAAAATTTGTGTGGGAAAAA
AAAAACAAAGGCCAAAATAGCATCCAACTCATCAAAGTATGAAGATCTCA
TACTATTTTCAGCGGNCGAGTTATTATCCTGCTGCCTTCTCACATCTTTG
CTTCTCAATATCCTTCTTCCCCCCCTAAATCTAAATCTCTGC

AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTCTGTTCCTGCAAGCAAAGTGTGTGGTGTGG
TATGAGGAATTTTCTGTTGGTCATCTATAGTTGGGCATTTAACCTACACT
TAACAGGGATTTTTTTCCCCTGTGAAACTCCCATGGAGAAGATTAGCATT
TTATTTGCAGGGGCAAACAATTAGAGATACCTTCTGGGTTAGTGATGGGA
GCATATCACTCATTTTTCTTTTAGATGTAAGATCCTATTGGTACAAATCC
ATGTAGACCCTTTGTTCAGGGCCATAGTTTCTGTGAGTTCATATGAGCTC
TGTTTCTGTTGTGTCTAGAAGGGCTTGTTTGTTTGATATCCTCTGTCACA
TTTGGCACTTAAACTTTTAAAGCTCATATATTTTCTGAACAGTGAGGAGA
GGGATTTGATAGAGATAACCACTTTAGAGCTCAGTTTTCCAATGTCTCTC
ATTCTATTTATATTGTCTGACTATGAGTCTCTATGTTTGGTCCCTTAGGG
TGCAAGATGAAACTTCTCTGATGATACCTGAACAAGGCACAGATCCCTAA
GTATAGCATAATGCTATCCCCACTCCGCTTATTGGGTCTTCCCTTTTATT
ACAGGAAAAAATTTAGCTTTCCTCTATGGCCCTGAACACTTTAGTCTCCA
TGTTCTGGGTCCCCCACCCACCTTTGATTTTTGCCCCCCTACTTCG

Query= MSMg01no372_g09.b1 MSMg01no372_g09.b1 CHROMAT_FILE:
MSMg01no372_g09.b1 PHD_FILE: MSMg01no372_g09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:08 2005
         (540 letters)



>mm_chr12_94820501_94821433
          Length = 933

 Score =  930 bits (481), Expect = 0.0
 Identities = 523/540 (96%), Gaps = 7/540 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   gatcacaaatctgtactatacatttcaattactgttttgaacagcctttaggaaatcctg 60
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gatcacaaatctgtactataaatttcaattactgttttgaacagcctttaggaaatcctg 260

                                                                       
Query: 61  ggaactgaagaggatgtgatacatcacttcctttgtttattcatcaaatgtaaaattttc 120
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| 
Sbjct: 261 ggaactgaagaggatgtgatatatcacttcctttgtttattcatcaaatgtaaaatttta 320

                                                                       
Query: 121 tttttgttacagaggtaagttaccagataggaaaatggaattttctgagtgtgtctttcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttttgttacagaggtaagttaccagataggaaaatggaattttctgagtgtgtctttcc 380

                                                                       
Query: 181 aaaactcagacactgaaatcctaactcccagatggacactttggggcgggggcggggggg 240
           ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| 
Sbjct: 381 aaaactcagacactgaaatcctaactcccagatggacactttggggcagggg-ggggggc 439

                                                                       
Query: 241 gttttaggaaggattaggacctaattagctcaggaaggtggaatgtccattaattaggac 300
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 -----aggaaggattaggacctaattagctcaggaaggtggaatgtccattaattaggac 494

                                                                       
Query: 301 aaaacattggggtaggaattctgagaagaattatcatcgtctttctatcttataagcaca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aaaacattggggtaggaattctgagaagaattatcatcgtctttctatcttataagcaca 554

                                                                       
Query: 361 tagcaagaaagtggaaatatgcatttcacaattggcatgcctaaacaagattttatcata 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tagcaagaaagtggaaatatgcatttcacaattggcatgcctaaacaagattttatcata 614

                                                                       
Query: 421 agccaatttatgagtacatatgatatgttatagtagatagaattaataagacaggaagac 480
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 615 agccaatttatgagtacatatgatatgttatagtagatagaattaataagacaggaaggc 674

                                                                       
Query: 481 tgacttanatttttaggaattagttgaaaataaaatttgtgtgggaaaaaaaaaacaaag 540
           ||||||| |||||||||||||||||||||||||||||| |||||| || ||||| |||||
Sbjct: 675 tgacttaaatttttaggaattagttgaaaataaaatttatgtggggaagaaaaa-caaag 733


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 540
Length of database: 933
Length adjustment: 10
Effective length of query: 530
Effective length of database: 923
Effective search space:   489190
Effective search space used:   489190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)