NNTTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTTTTAAATTGCACATTTGTAAAAAGTGTTTGTTTGAAACA
ATTAGTGCTTAGAAAATACTGATGGAGACATTTAAACAGTAGGAAATTGT
TTATTGATTACCTCCCACTATTGTGTGTGCTGTCTATGTAGCTAGACTTC
CTATTTTTCCTCCAACTTTTTATTATTTTATTTATTTACATTCTTGTCGT
TGTCCCCTTTCATTTTCCCTCTCACAGTTCCTCATCCCATTCCTACTACC
CCTTGCCTCTTCCCCTTCCACCAGGACTCCCCCTTATCAAGTCTTTTGAG
GATTATGCACAGCTTCTCCCACTAAGGCCAGATCAGGCAGACCTCTGCTA
TATTTGTGCCAGGGGCCTTGGACTGGCCCATGTACTCACCTGGTTGGTGT
CTCAGTCTCTGGGAGCTCCCAGAGGTCTGTATTAGGTGAGACTGCCGGTA
TTCTTATGAGGTTGCTCCCCTCAGCTTCCTCAATGCCTTCCCTAATTCAA
CCATAGAGGTTCTCTACTTCAGTTCAATTGTTGGGTATAAGTATCTGCAT
CTGTCTCAGTCAGCTGTTGGTAGGGTCTCTCAAGGGACAGCCATGCCACG
CTCCTGTCTGTAAGCATATCATAGCATCAGTAATAGTGTCAGGTCTTGGT
GCCCACCCATGGNATGGATCCCAAATTGTTCCAGTCCCTGGATCAC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTGTTTGATTT
TCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCC
TATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTC
TTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCAT
TAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTC
TGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACT
TTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCTTTGAT
CCATTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCGCA
TTCTTCTACATGATAACAACCAGTTGTGCCAGCACCATTTGTTGAAAATG
CTGTCTTTCTTCCAATGGATGGTTTTAGTTCCCTTGTCTAAGAACATGTG
ACCATACGTGTGTGGCATTCTTTCTTGGGTCTTCAATTCTATTTCTTTGG
TCCACTTGGCCGTCTCTTTAACAGTTCCTGGCATCTTTCTAACATAAATT
GCTCTGTATTTATACTTTTTGTTTTGTTATTGGTTGATTTCTCCTATAGT
TTCCTTTTTCTCTCCTACCTATTTTTTTTTTG

Query= MSMg01no374_b03.b1 MSMg01no374_b03.b1 CHROMAT_FILE:
MSMg01no374_b03.b1 PHD_FILE: MSMg01no374_b03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:11 2005
         (588 letters)



>mm_chr12_63607789_63608777
          Length = 989

 Score = 1079 bits (558), Expect = 0.0
 Identities = 579/586 (98%), Gaps = 1/586 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcttttaaattgcacatttgtaaaaagtgtttgtttgaaacaattagtgcttaga 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttttaaattgcacatttgtaaaaagtgtttgtttgaaacaattagtgcttaga 263

                                                                       
Query: 64  aaatactgatggagacatttaaacagtaggaaattgtttattgattacctcccact-att 122
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 264 aaatactgatggagacatttaaacagtaggaaattgtttattgattacctcccacttatt 323

                                                                       
Query: 123 gtgtgtgctgtctatgtagctagacttcctatttttcctccaactttttattattttatt 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtgtgtgctgtctatgtagctagacttcctatttttcctccaactttttattattttatt 383

                                                                       
Query: 183 tatttacattcttgtcgttgtcccctttcattttccctctcacagttcctcatcccattc 242
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tatttacattcttgtcattgtcccctttcattttccctctcacagttcctcatcccattc 443

                                                                       
Query: 243 ctactaccccttgcctcttccccttccaccaggactcccccttatcaagtcttttgagga 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctactaccccttgcctcttccccttccaccaggactcccccttatcaagtcttttgagga 503

                                                                       
Query: 303 ttatgcacagcttctcccactaaggccagatcaggcagacctctgctatatttgtgccag 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttatgcacagcttctcccactaaggccagatcaggcagacctctgctatatttgtgccag 563

                                                                       
Query: 363 gggccttggactggcccatgtactcacctggttggtgtctcagtctctgggagctcccag 422
           ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||
Sbjct: 564 gggccttggactggcccatgtacttgcctggttggtgtctcagtctctgggagctcccag 623

                                                                       
Query: 423 aggtctgtattaggtgagactgccggtattcttatgaggttgctcccctcagcttcctca 482
           |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 624 aggtttgtattaggtgagactgccggtattcttatgaggttgctcccctcagtttcctca 683

                                                                       
Query: 483 atgccttccctaattcaaccatagaggttctctacttcagttcaattgttgggtataagt 542
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 atcccttccctaattcaaccatagaggttctctacttcagttcaattgttgggtataagt 743

                                                         
Query: 543 atctgcatctgtctcagtcagctgttggtagggtctctcaagggac 588
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 atctgcatctgtctcagtcagctgttggtagggtctctcaagggac 789


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 989
Length adjustment: 10
Effective length of query: 578
Effective length of database: 979
Effective search space:   565862
Effective search space used:   565862
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)