Query= MSMg01no375_p24.b1 MSMg01no375_p24.b1 CHROMAT_FILE:
MSMg01no375_p24.b1 PHD_FILE: MSMg01no375_p24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:47 2005
(411 letters)
>mm_chr12_108790687_108791497
Length = 811
Score = 779 bits (403), Expect = 0.0
Identities = 406/407 (99%)
Strand = Plus / Minus
Query: 5 gaattcttcgtgtcttcagttcgcccttgtattctggagtacagccatgaagttcatcac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gaattcttcgtgtcttcagttcgcccttgtattctggagtacagccatgaagttcatcac 552
Query: 65 tctcaaaacagacaccatgtaaccagtcagacccttggtgcattaagccatgtgctcctt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tctcaaaacagacaccatgtaaccagtcagacccttggtgcattaagccatgtgctcctt 492
Query: 125 ggagtggaggaggcacactcaggtcaccctgtcccctgtccccacaataacacacagcct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ggagtggaggaggcacactcaggtcaccctgtcccctgtccccacaataacacacagcct 432
Query: 185 ctgttgctccatgtgtctctgagctttttttgcgtaggttggtttcaggttagagttgtt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ctgttgctccatgtgtctctgagctttttttgcgtaggttggtttcaggttagagttgtt 372
Query: 245 tttccacagctggggatggtggatggggttaacctctgctggactgtggttcagcctgtg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tttccacagctggggatggtggatggggttaacctctgctggactgtggttcagcctgtg 312
Query: 305 acatacagaaggtttaatgagctgagcatatgaggtatggtgaactccttagactgcagc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 acatacagaaggtttaatgagctgagcatatgaggtatggtgaactccttagactgcagc 252
Query: 365 tctatgctggctgtggtctagggagcacctctctgggggagcacctc 411
||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 251 tctatgctggctgtggtctggggagcacctctctgggggagcacctc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space: 322404
Effective search space used: 322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no375_p24.g1 MSMg01no375_p24.g1 CHROMAT_FILE:
MSMg01no375_p24.g1 PHD_FILE: MSMg01no375_p24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:47 2005
(425 letters)
>mm_chr12_108742627_108743449
Length = 823
Score = 735 bits (380), Expect = 0.0
Identities = 414/426 (97%), Gaps = 3/426 (0%)
Strand = Plus / Plus
Query: 1 aaaaaactattctcctacatagttcattggttaaagcaaaacttaaaatagaaaatagaa 60
|||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 201 aaaaaattattctcctacatagttcactggttaaaacaaaacttaaaatagaaaatagaa 260
Query: 61 acaatatacctatatatgggtaaaatgtaaggacatgtaacaaatccttagacatatatc 120
|||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||
Sbjct: 261 acaatatacctatatatgggtaaaatataaggac--gtaacaaatccttagacatatgtc 318
Query: 121 caaagagacaaatggaaaaaatatcaagctataataacatgtattagaaactataggtta 180
||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 319 caaagagttaaatggaaaaaatatcaagctataacaacatgtattagaaactataggtta 378
Query: 181 gaaaaagatgtacattttatcttaaaatgttaacataaaataagttattaagttagaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gaaaaagatgtacattttatcttaaaatgttaacataaaataagttattaagttagaaga 438
Query: 241 taaaagtaattaatttaaggcagaaatatcttacataagaagcaaagaaaagcaggtata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 taaaagtaattaatttaaggcagaaatatcttacataagaagcaaagaaaagcaggtata 498
Query: 301 accaacagaacccagagcagttatatgaaaagattaataaaataaccaaatggcttgtca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 accaacagaacccagagcagttatatgaaaagattaataaaataaccaaatggcttgtca 558
Query: 361 agaaatagaaaa-aaaaaggaaccaaaataggtctgggaacggagatgatgcacagtcat 419
|||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 559 agaaatagaaaagaaaaaggaaccaaaataggtctgggaacggagatgatgcatagtcat 618
Query: 420 agaatc 425
||||||
Sbjct: 619 agaatc 624
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 823
Length adjustment: 9
Effective length of query: 416
Effective length of database: 814
Effective search space: 338624
Effective search space used: 338624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
