Query= MSMg01no376_k15.b1 MSMg01no376_k15.b1 CHROMAT_FILE:
MSMg01no376_k15.b1 PHD_FILE: MSMg01no376_k15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:36 2005
(372 letters)
>mm_chr12_77719777_77720551
Length = 775
Score = 659 bits (341), Expect = 0.0
Identities = 362/369 (98%), Gaps = 3/369 (0%)
Strand = Plus / Minus
Query: 5 gaattcattgaact-aacatcagcgtataccagcatatctgcctcctttcttcccgcctg 63
|||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 573 gaattcattgaactaaaaatcagcgtataccagcatatctgcctcctttcttccctcctg 514
Query: 64 gagaccaagcattcaggatggagagggaggaagtcagaactgcacatctggagagtagga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gagaccaagcattcaggatggagagggaggaagtcagaactgcacatctggagagtagga 454
Query: 124 aacgctggacaccagaggacctgctgccgcttactgctcctgttctcttttctctgtcca 183
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 453 aacgctggacaccagaggacctgctgccgctcactgctcctgttctcttttctctgtcca 394
Query: 184 tctcaggtttgacatcctggaccaggagatgaagaccttgatggcgcagattgatggagt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tctcaggtttgacatcctggaccaggagatgaagaccttgatggcgcagattgatggagt 334
Query: 244 gaaccttgccgccaacaacctggtagagagtggccacccacgcagtggggaggtgaagca 303
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 333 gaaccttgccgccaacaacctggtagagagtggccacccacgaagtggggaggtgaagca 274
Query: 304 atatcaggaccgcctgaacaagaggtggggagtgggcag-agcaggggt-gggtgtgtgt 361
||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 273 atatcaggaccgcctgaacaagaggtggggagtgggcagaagcaggggtggggtgtgtgt 214
Query: 362 gagggggtt 370
|||||||||
Sbjct: 213 gagggggtt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 775
Length adjustment: 9
Effective length of query: 363
Effective length of database: 766
Effective search space: 278058
Effective search space used: 278058
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_k15.g1 MSMg01no376_k15.g1 CHROMAT_FILE:
MSMg01no376_k15.g1 PHD_FILE: MSMg01no376_k15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:37 2005
(470 letters)
>mm_chr12_77525888_77526756
Length = 869
Score = 901 bits (466), Expect = 0.0
Identities = 469/470 (99%), Gaps = 1/470 (0%)
Strand = Plus / Plus
Query: 1 actctatagatcaggctagccttggactcagagatcccacctgcctctgcctcctgagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actctatagatcaggctagccttggactcagagatcccacctgcctctgcctcctgagtt 260
Query: 61 ctgggattaaagacgtgcaccaccacggcctggctgtaagaagattttttaaaaggttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgggattaaagacgtgcaccaccacggcctggctgtaagaagattttttaaaaggttat 320
Query: 121 tttattattttatgtgtggggtactttgcctgtatgtctgtgcactacatatgtacctaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttattattttatgtgtggggtactttgcctgtatgtctgtgcactacatatgtacctaa 380
Query: 181 ttctcacagagaccagaagagggcatcggatttcccagaactgtacttacaaatggttgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttctcacagagaccagaagagggcatcggatttcccagaactgtacttacaaatggttgt 440
Query: 241 gagacaccatgtgggtgctgggaatagaacctgggtcctttgcaagaacagccagtgctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagacaccatgtgggtgctgggaatagaacctgggtcctttgcaagaacagccagtgctc 500
Query: 301 ttaaccactgagtcatctctccagcctttaggagctaatgttttattacagcatggctat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttaaccactgagtcatctctccagcctttaggagctaatgttttattacagcatggctat 560
Query: 361 tgccaggaggttggctaacctcctagcagaaagtaccaaactaaatatattattcccatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgccaggaggttggctaacctcctagcagaaagtaccaaactaaatatattattcccatg 620
Query: 421 ggatagtatttctcaaaaaaaaaaaaaaatgtccttatgggatctgggaa 470
|||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 621 ggatagtatttctcaaaaaaaaaaaaaa-tgtccttatgggatctgggaa 669
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 869
Length adjustment: 10
Effective length of query: 460
Effective length of database: 859
Effective search space: 395140
Effective search space used: 395140
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
