NNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCCATGATTTTGTAGGAGCAGGAGACGTGAAATGGTTCAAAGT
GTTCCATGGCCCAAGTATGCTATTTAGATTTCTCCCGATGGAGGCTCACT
CCTTGCTTCGGTTTCTTGTTCTTTTGATAAGTGAGCAGAATAATCCAGTT
TTGGGTGGAGGGCCCATCAGCATTGGGGCTTGGTTCTTGTGTGTAATTTT
TATCTAGGAAAGAGAAAGAGTGATACCAAGAGAAGATATTAAATTCTAGG
AACCTCTGCTGCTGTGCTTCATGATTTACACAAAGTTAAAATTCAATTTC
AGAAATTTTGAAAATATTTAAGGGAGACAAGGACATACTTTTAAATAATT
CTCACATGCCAGCCAAACATAGAAAATATCTGGTCATGATTTTAATATGG
TCTTATATCTAACTCACTAGTACTACTCCAGTTTCTCAGACCTCTTAATT
TAGATTGCATGAGTAACCAGCGTTATAGATGTGCTATATCTCTTCAATCC
ATGGCCCAGTGTTAGGAGGTACTTAGCATTAGGCAAATCTTATTTATCTT
TTTAATTCCATTGTTTCTCTCTTTCATCCCCAGCTGCTTTGTTTTTCTTT
CCCATTCCTTTCTTTAAAATGTACTCCCCTTACTTTTATGGCTTTTTTCC
CCCCTAAATGCCCCCCTTTACTTTTCTCACCTTTTTCCTTCCCCCCACAC
TCG

NNCCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXACTCAAGCAGAGTAGAGTCAGT
CAGTTGGGAGTCAGTACAATGAGTGCAGTACAGTGGAGTTGAGTTTGTTT
GTGAGCTGATGCAATTCAGAGTAGGTCACCAGTAGCAGTTGAAGCCAGAA
AGTAAGAAGAAGCCAGAAGACTAGAACAAATTGCCAGAGTTAGTTTGAGG
CCAAGCAGAACAATTTAGTGAGAAGCTGAGAGAAGCCAGCTGAATAGTTA
GCTTGGAGAGGCGTTTGAGCAGAAGAGCTAGCTGAACCAGTCGGGCAGAG
TTTAGAAAGTACTAGAAAGGGTGAATTTATTCAGCAGTAAGTCTCTAGGA
CAATTACATCAGGAAAATAAAATATACTTTTACAGCTATGTATAGCCCTA
TTGTTGGAATGAATGACCCCTTTAGGCTCATATATTTGAATTCTTTGTCC
CAGTTGGTGAAACTCTTTTTTTATTAGGATTAGAAGGTGTGGCCCTATAG
GAAGAAGTGTGTCACTATGTGTAGGCTTTGAGATTTTAAAAAGAATTGTG
GCTAGGCCCAATGTACCCTGACTGCCTCCTGCTTGTGGATCACATGTGAG
TTCCCACCTGTGCCTATAAACATTTTGTCCGTCCCAAAGGAAGCTAGCCT
TCTGAACTGTTATCCCAATAACCACCTTTTTTTATTATATTGTTTTTCCC
CTGGGTTTCTTG

Query= MSMg01no377_c10.b1 MSMg01no377_c10.b1 CHROMAT_FILE:
MSMg01no377_c10.b1 PHD_FILE: MSMg01no377_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:14 2005
         (464 letters)



>mm_chr12_39356706_39357569
          Length = 864

 Score =  882 bits (456), Expect = 0.0
 Identities = 459/460 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccatgattttgtaggagcaggagacgtgaaatggttcaaagtgttccatggccca 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 gaattccatgattttgtaggagcaggagacgtgaaatggttcaaagtgttccatggccca 605

                                                                       
Query: 65  agtatgctatttagatttctcccgatggaggctcactccttgcttcggtttcttgttctt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 agtatgctatttagatttctcccgatggaggctcactccttgcttcggtttcttgttctt 545

                                                                       
Query: 125 ttgataagtgagcagaataatccagttttgggtggagggcccatcagcattggggcttgg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 ttgataagtgagcagaataatccagttttgggtggagggcccatcagcattggggcttgg 485

                                                                       
Query: 185 ttcttgtgtgtaatttttatctaggaaagagaaagagtgataccaagagaagatattaaa 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ttcttgtgtgtaatttttatctaggaaagagaaagagtgataccaagagaagatattaaa 425

                                                                       
Query: 245 ttctaggaacctctgctgctgtgcttcatgatttacacaaagttaaaattcaatttcaga 304
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 424 ttctaggaacctctgctgctgtgcttcatgagttacacaaagttaaaattcaatttcaga 365

                                                                       
Query: 305 aattttgaaaatatttaagggagacaaggacatacttttaaataattctcacatgccagc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 aattttgaaaatatttaagggagacaaggacatacttttaaataattctcacatgccagc 305

                                                                       
Query: 365 caaacatagaaaatatctggtcatgattttaatatggtcttatatctaactcactagtac 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 caaacatagaaaatatctggtcatgattttaatatggtcttatatctaactcactagtac 245

                                                   
Query: 425 tactccagtttctcagacctcttaatttagattgcatgag 464
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tactccagtttctcagacctcttaatttagattgcatgag 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space:   387716
Effective search space used:   387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)