Query= MSMg01no380_h07.b1 MSMg01no380_h07.b1 CHROMAT_FILE:
MSMg01no380_h07.b1 PHD_FILE: MSMg01no380_h07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:32 2005
(566 letters)
>mm_chr12_16105584_16106549
Length = 966
Score = 690 bits (357), Expect = 0.0
Identities = 387/397 (97%), Gaps = 1/397 (0%)
Strand = Plus / Minus
Query: 7 gaattcacttactttctctaattccatcgagcatatttggcatacttcaaaattgcttgt 66
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 gaattcacttactttctttaattccatcgagcatatttggcatacttcaaaattgcttgt 338
Query: 67 ctgttcatttcagtcattgtatgaactgaaatcttggcatgccttgagaatcgtcacgtg 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ctgttcatttcagtcattgtatgaactgaaatcttggcatgccttgagaatcgtcacgtg 278
Query: 127 tcctcttgtccttatgtcaggaaatattacgtcataccctgagtatttgcaagtgcgtta 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tcctcttgtccttatgtcaggaaatattacgtcataccctgagtatttgcaagtgcgtta 218
Query: 187 tttgatgggtgtgattgttgtaattgtcagcttgacacaatcacgaatcatttgtgaaga 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 tttgatgggtgtgattgttgtaattgtcagcttgacacaatcacgaatcatttgtgaaga 158
Query: 247 gagtcatgaatagggactgtgtagaaaactttgttctgtgggtatgtctatggtggatta 306
||| ||||| | |||||||||||||| | |||| |||||||||||||||||||||||||
Sbjct: 157 gagccatgattggggactgtgtagaagagtttggcctgtgggtatgtctatggtggatta 98
Query: 307 tcttgattgcattaattaagatcagaagaacttgcctactgtgggcagcaccatt-ttta 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 97 tcttgattgcattaattaagatcagaagaacttgcctactgtgggcagcaccattcctta 38
Query: 366 agcaggggatttttaattgaataagaatggagaaagt 402
|||||||||||||||||||||||||||||||||||||
Sbjct: 37 agcaggggatttttaattgaataagaatggagaaagt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 966
Length adjustment: 10
Effective length of query: 556
Effective length of database: 956
Effective search space: 531536
Effective search space used: 531536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no380_h07.g1 MSMg01no380_h07.g1 CHROMAT_FILE:
MSMg01no380_h07.g1 PHD_FILE: MSMg01no380_h07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:32 2005
(510 letters)
>mm_chr12_15938466_15939372
Length = 907
Score = 948 bits (490), Expect = 0.0
Identities = 505/510 (99%), Gaps = 3/510 (0%)
Strand = Plus / Plus
Query: 1 ttcttcaacattaatacaaagcaattcacagagcccagcatatgattctccttaagatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcttcaacattaatacaaagcaattcacagagcccagcatatgattctccttaagatct 260
Query: 61 gaaagttgttttccatgggggggatgctggtctcctgtgatcttccaggggaagtcagtt 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaagttgttttccatgggggg-atgctggtctcctgtgatcttccaggggaagtcagtt 319
Query: 121 ccctgtgtaggcttcctttatccactgtggctgttttaagcttctcatgtgggatcctat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ccctgtgtaggcttcctttatccactgtggctgttttaagcttctcatgtgggatcctat 379
Query: 181 gaaattccccaaaggacttcatcgatttcccatgaccttgctgttgtaaagccactaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gaaattccccaaaggacttcatcgatttcccatgaccttgctgttgtaaagccactaatt 439
Query: 241 cctctttttaagagtgttctctgagttagaaaaccccaggagttggtaccttaggttgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cctctttttaagagtgttctctgagttagaaaaccccaggagttggtaccttaggttgaa 499
Query: 301 ttaccatatactagaccgacataaatgactgcgagaacgggacgctgagatgggatagga 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 500 ttaccatatactagaccgacataaatgactgcgagaacgggacactgagatgggatagga 559
Query: 361 aaaaaaaggtcattgaaactaagagaggtaagagagaaaggtgacaccctgtgactcatt 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aaaaaaaggtcattgaaactaagagaggtaagagagaaaggtgacaccctgtgactcat- 618
Query: 421 ctctctctaccttgtgaccgagccaatgaggtctatggaaaaataagagagtgttccact 480
| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 619 c-ctctctaccttgtgaccgagccaaagaggtctatggaaaaataagagagtgttccact 677
Query: 481 ccagtgacttccaaatctgccaggatgtta 510
||||||||||||||||||||||||||||||
Sbjct: 678 ccagtgacttccaaatctgccaggatgtta 707
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 907
Length adjustment: 10
Effective length of query: 500
Effective length of database: 897
Effective search space: 448500
Effective search space used: 448500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
