MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-382J12
Chromosome	12 (Build37)
Map Location	72,018,212 - 72,018,553
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Spg3a, EG622339, Sav1, LOC100040999, Nin, ENSMUSG00000056391, Gm804, Pygl, Trim9, Txndc1, LOC100040965, LOC100041061, Frmd6
Downstream gene	Actr10, Psma3, 3110056K07Rik, Arid4a, Timm9, LOC100041035, 2700049A03Rik, LOC666162, Dact1, LOC100041190, Daam1, LOC666213
Link	Open Mouse BAC browser

Click to get alignment info.

name	Spg3a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73991 MGI:1921241
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG622339 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622339 MGI:3646088
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sav1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64010 MGI:1927144
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040999 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040999
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 1 Protein

name	Nin (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18080 MGI:105108
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	ENSMUSG00000056391 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:791312 MGI:3641988
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	Gm804 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:328121 MGI:2685650
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	Pygl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110095 MGI:97829
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Trim9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94090 MGI:2137354
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Txndc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72736 MGI:1919986
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040965 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040965
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	LOC100041061 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041061
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Frmd6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319710 MGI:2442579
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Actr10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56444 MGI:1891654
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Psma3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19167 MGI:104883
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	3110056K07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73204 MGI:1920454
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 16 ESTs

name	Arid4a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238247 MGI:2444354
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Timm9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30056 MGI:1353436
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	LOC100041035 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041035
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs

name	2700049A03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76967 MGI:1924217
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 108 ESTs, 1 Protein

name	LOC666162 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666162
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Dact1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:59036 MGI:1891740
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041190 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041190
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	Daam1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208846 MGI:1914596
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC666213 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666213
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 13 ESTs, 7 Proteins pseudo : _no_value

name	Spg3a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348381 GeneID:73991 MGI:1921241
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : spastic paraplegia 3A homolog (human) transcript_id : NM_178628.4

name	EG622339 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486830 GeneID:622339 MGI:3646088
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG622339 transcript_id : NM_001081297.1

name	Sav1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130409 GeneID:64010 MGI:1927144
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : salvador homolog 1 (Drosophila) transcript_id : NM_022028.2

name	LOC100040999 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263281 GeneID:100040999
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 1 Protein product : similar to Spg3a protein transcript_id : XM_001475450.1

name	Nin (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125346100 GeneID:18080 MGI:105108
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ninein transcript_id : NM_001081453.1

name	Nin (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125346155 GeneID:18080 MGI:105108
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ninein transcript_id : NM_008697.2

name	ENSMUSG00000056391 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263277 GeneID:791312 MGI:3641988
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : predicted gene, ENSMUSG00000056391 transcript_id : XM_001475522.1

name	Gm804 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263283 GeneID:328121 MGI:2685650
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : gene model 804, (NCBI), transcript variant 1 transcript_id : XM_001475466.1

name	Gm804 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263285 GeneID:328121 MGI:2685650
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : gene model 804, (NCBI), transcript variant 2 transcript_id : XM_001475489.1

name	Pygl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:18875341 GeneID:110095 MGI:97829
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : liver glycogen phosphorylase transcript_id : NM_133198.1

name	Trim9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142374604 GeneID:94090 MGI:2137354
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tripartite motif protein 9 transcript_id : NM_053167.2

name	Txndc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33859721 GeneID:72736 MGI:1919986
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thioredoxin domain containing 1 transcript_id : NM_028339.1

name	LOC100040965 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263279 GeneID:100040965
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : similar to Ubtf protein transcript_id : XM_001475577.1

name	LOC100041061 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263290 GeneID:100041061
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041061 transcript_id : XM_001475657.1

name	Frmd6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328509 GeneID:319710 MGI:2442579
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : FERM domain containing 6 transcript_id : NM_028127.3

name	Actr10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9789886 GeneID:56444 MGI:1891654
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ARP10 actin-related protein 10 homolog (S. cerevisiae) transcript_id : NM_019785.1

name	Psma3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385658 GeneID:19167 MGI:104883
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : proteasome (prosome, macropain) subunit, alpha type 3 transcript_id : NM_011184.3

name	3110056K07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263287 GeneID:73204 MGI:1920454
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 16 ESTs product : RIKEN cDNA 3110056K07 gene transcript_id : XM_898262.3

name	Arid4a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487104 GeneID:238247 MGI:2444354
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : AT rich interactive domain 4A (Rbp1 like) transcript_id : NM_001081195.1

name	Timm9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:67846098 GeneID:30056 MGI:1353436
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : translocase of inner mitochondrial membrane 9 homolog (yeast) transcript_id : NM_001024854.1

name	Timm9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:67846097 GeneID:30056 MGI:1353436
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : translocase of inner mitochondrial membrane 9 homolog (yeast) transcript_id : NM_013896.3

name	Timm9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:67846108 GeneID:30056 MGI:1353436
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : translocase of inner mitochondrial membrane 9 homolog (yeast) transcript_id : NM_001024853.1

name	LOC100041035 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263288 GeneID:100041035
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs product : hypothetical protein LOC100041035 transcript_id : XM_001475684.1

name	2700049A03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94392886 GeneID:76967 MGI:1924217
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 108 ESTs product : RIKEN cDNA 2700049A03 gene transcript_id : XM_126944.6

name	Dact1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130441 GeneID:59036 MGI:1891740
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dapper homolog 1, antagonist of beta-catenin (xenopus) transcript_id : NM_021532.3

name	LOC100041190 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263297 GeneID:100041190
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : hypothetical protein LOC100041190 transcript_id : XM_001475955.1

name	Daam1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:78191776 GeneID:208846 MGI:1914596
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dishevelled associated activator of morphogenesis 1 transcript_id : NM_026102.2

name	Daam1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:78191778 GeneID:208846 MGI:1914596
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dishevelled associated activator of morphogenesis 1 transcript_id : NM_172464.2

name	Spg3a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30519971 GeneID:73991 MGI:1921241
definition	GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006955 - immune response [Evidence IEA] codon_start : 1 product : atlastin protein_id : NP_848743.1

name	EG622339 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486831 GeneID:622339 MGI:3646088
definition	GO_function : GO:0004365 - glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA] GO_process : GO:0006006 - glucose metabolism [Evidence IEA]; GO:0006096 - glycolysis [Evidence IEA] codon_start : 1 product : predicted gene, EG622339 protein_id : NP_001074766.1

name	Sav1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11528514 CCDS:CCDS25956.1 GeneID:64010 MGI:1927144
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : WW domain-containing protein 3; WW domain-containing protein 4 product : salvador homolog 1 protein_id : NP_071311.1

name	LOC100040999 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263282 GeneID:100040999
definition	codon_start : 1 product : similar to Spg3a protein protein_id : XP_001475500.1

name	Nin (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125346101 GeneID:18080 MGI:105108
definition	GO_component : GO:0005813 - centrosome [Evidence ISS]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0051642 - centrosome localization [Evidence ISS] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : ninein isoform 1 protein_id : NP_001074922.1

name	Nin (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125346156 GeneID:18080 MGI:105108
definition	GO_component : GO:0005813 - centrosome [Evidence ISS]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0051642 - centrosome localization [Evidence ISS] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : ninein isoform 2 protein_id : NP_032723.2

name	ENSMUSG00000056391 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263278 GeneID:791312 MGI:3641988
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475572.1

name	Gm804 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263284 GeneID:328121 MGI:2685650
definition	codon_start : 1 product : similar to C14ORF29 isoform 1 protein_id : XP_001475516.1

name	Gm804 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263286 GeneID:328121 MGI:2685650
definition	codon_start : 1 product : similar to C14ORF29 isoform 2 protein_id : XP_001475539.1

name	Pygl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18875342 CCDS:CCDS25957.1 GeneID:110095 MGI:97829
definition	GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004645 - phosphorylase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA]; GO:0005977 - glycogen metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : liver glycogen phosphorylase protein_id : NP_573461.1

name	Trim9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39930487 GeneID:94090 MGI:2137354
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0019717 - synaptosome [Evidence ISS] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI] GO_process : GO:0016079 - synaptic vesicle exocytosis [Evidence ISS] codon_start : 1 exception : mismatches in translation product : tripartite motif protein 9 protein_id : NP_444397.1

name	Txndc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859722 CCDS:CCDS25958.1 GeneID:72736 MGI:1919986
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : thioredoxin domain containing 1 protein_id : NP_082615.1

name	LOC100040965 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263280 GeneID:100040965
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475627.1

name	LOC100041061 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263291 GeneID:100041061
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475707.1

name	Frmd6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328510 CCDS:CCDS25959.1 GeneID:319710 MGI:2442579
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : FERM domain containing 6 protein_id : NP_082403.2

name	Actr10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9789887 CCDS:CCDS25960.1 GeneID:56444 MGI:1891654
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005869 - dynactin complex [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007018 - microtubule-based movement [Evidence IDA] codon_start : 1 exception : mismatches in translation note : actin-related protein 11; actin-related protein 10 homolog; actin-related protein 11 homolog product : ARP10 actin-related protein 10 homolog protein_id : NP_062759.1

name	Psma3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981534 CCDS:CCDS25961.1 GeneID:19167 MGI:104883
definition	GO_component : GO:0005829 - cytosol [Evidence IEA]; GO:0005839 - proteasome core complex (sensu Eukaryota) [Evidence IEA]; GO:0043234 - protein complex [Evidence IEA] GO_function : GO:0004175 - endopeptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004298 - threonine endopeptidase activity [Evidence IEA] GO_process : GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : proteasome (prosome, macropain) subunit, alpha type 3 protein_id : NP_035314.2

name	3110056K07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94392923 GeneID:73204 MGI:1920454
definition	codon_start : 1 product : hypothetical protein LOC73204 protein_id : XP_903355.2

name	Arid4a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487105 GeneID:238247 MGI:2444354
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0000785 - chromatin [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003682 - chromatin binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006333 - chromatin assembly or disassembly [Evidence IEA] codon_start : 1 note : retinoblastoma binding protein 1 product : retinoblastoma-binding protein 1 protein_id : NP_001074664.1

name	Timm9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:67846109 CCDS:CCDS25962.1 GeneID:30056 MGI:1353436
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] codon_start : 1 product : translocase of inner mitochondrial membrane 10 homolog protein_id : NP_001020024.1

name	Timm9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:67846099 CCDS:CCDS25962.1 GeneID:30056 MGI:1353436
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] codon_start : 1 product : translocase of inner mitochondrial membrane 10 homolog protein_id : NP_001020025.1

name	Timm9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305573 CCDS:CCDS25962.1 GeneID:30056 MGI:1353436
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] codon_start : 1 product : translocase of inner mitochondrial membrane 10 homolog protein_id : NP_038924.1

name	LOC100041035 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263289 GeneID:100041035
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475734.1

name	2700049A03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82942749 GeneID:76967 MGI:1924217
definition	codon_start : 1 product : hypothetical protein LOC76967 protein_id : XP_126944.5

name	Dact1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24158474 CCDS:CCDS25963.1 GeneID:59036 MGI:1891740
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007275 - development [Evidence IEA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 note : thymus expressed gene 3 product : dapper 1 protein_id : NP_067507.2

name	LOC100041190 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263298 GeneID:100041190
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476005.1

name	Daam1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:78191777 CCDS:CCDS25964.1 GeneID:208846 MGI:1914596
definition	GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005488 - binding [Evidence IEA]; GO:0017048 - Rho GTPase binding [Evidence IEA] GO_process : GO:0030036 - actin cytoskeleton organization and biogenesis [Evidence IEA]; GO:0016043 - cell organization and biogenesis [Evidence IEA] codon_start : 1 product : dishevelled associated activator of morphogenesis 1 protein_id : NP_080378.2

name	Daam1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:78191779 CCDS:CCDS25964.1 GeneID:208846 MGI:1914596
definition	GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005488 - binding [Evidence IEA]; GO:0017048 - Rho GTPase binding [Evidence IEA] GO_process : GO:0030036 - actin cytoskeleton organization and biogenesis [Evidence IEA]; GO:0016043 - cell organization and biogenesis [Evidence IEA] codon_start : 1 product : dishevelled associated activator of morphogenesis 1 protein_id : NP_766052.2

name	LOC666162 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666162
definition	number : 4 pseudo : _no_value

name	LOC666162 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666162
definition	number : 3 pseudo : _no_value

name	LOC666162 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666162
definition	number : 2 pseudo : _no_value

name	LOC666162 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666162
definition	number : 1 pseudo : _no_value

name	LOC666213 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149263292 GeneID:666213
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 13 ESTs, 7 Proteins product : similar to glyceraldehyde-3-phosphate dehydrogenase pseudo : _no_value transcript_id : XR_032449.1

clone name	MSMg01-390E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128M03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-271K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410D21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-392N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458I22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-321O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097K20
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-382J12.T7 (MSMg01no382_j12.b1)	MSMg01-382J12.TJ (MSMg01no382_j12.g1)
ACC	AG486461	AG486462
length	1,351	776
length of high quality (start - end)	---	342 (60 - 401)
definition	CHROMAT_FILE: MSMg01no382_j12.b1 PHD_FILE: MSMg01no382_j12.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:24:23 2005	CHROMAT_FILE: MSMg01no382_j12.g1 PHD_FILE: MSMg01no382_j12.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:24:23 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	TATTCTTTTCGTTCTGTTTTTCTNGTTTCTCTCATCGAGAAGCGCCCGCG GGTGCGTCGTGTGCGGGTGCGTGGCGCCGCCGACGTGCCGTGAGAGACTA CCATATCTACACTATCTCCCACACTTGTCGTCCATCATATCCTGGGCGTA GTGTATCGCGGCATCCACGAGATGACGAGCCAGTGGACATGTAGNCACTT TACTCTAGCGAACAGCACCCTTAGCAGCTGCGTGCGCTTCTAGCACGCCT CCTATATGTGTAGTGTGGGCGGTACGCTCATCTGGGTGTACTCGCAGACA GCGATCCCGCGCGTACGTATGAAGGAAGAGCGACGAACAGGAAGAACTAA GATGCCGTCCGGTGGTAGTGGTCGAGGATGAGCGCACGATATATGGGTGC AGTGCTAGCGAGTATCGCAGCACGGATAGTGGAACGCGCTATAGCCTTGA TGATGAAATTTGTGTGAATTAAGATAATCACATATATATGTCACATACTA CTCATTCAATGACAGGTAAGCTATTTCTGGCGCTCAGAGATCTATTGGGT GCGGACTCTATCATCTATGAATGTCGTCTAGTGTTGCGATATCCCGTGCA CAGGCNTCGAGTGCGGTCGCAGTGCGTGAGCCCGGGTGCGCGTCCGTGCC GATGGTCGTCGGTAACATGAGCCGTCGGTCGAGTACGGCCAGCGTATCAG TATCTACATCTACATCACAATACNCAATACTCACATTAGAATAGACAAGT GAGGACGCCGACATACGCGATGGATCGATGCGTGGCATATTGGCGCCGTG CAACCGCATGAAGTCACAGATTCGATTATATGACACAGTCCTCGAGGACC GATGGTACTGGAGAGATAGGCTGACTTGTATCACGGGAGTGAGCATGTAT ATACTAGCTCNCAGTCTTCACCAACGCCGCGTGTGAGATCATCGACGCAG GCCGATAGAGAGTACAGATAAGACTATGTACGCAGACGGCGAAGAGATGA TATATTCGCCTGTGAACGTCGTCGAGCTGCGAGTGCAGAACGAATGTGCA CCGCGAGTGATATGCACGCAGGACTAACATAATGAGTTTAGTTGATTAGA CGATCGTAGATATAGGCGCGGAATTACATACGACGGCGCGAGCGCTCGTA CGAGCTGCGGTCGCTGCGGNTGTGTAGGATGAGTGTGTGGTGAGTCGTCC ACGCTCCGGCGTTCGTTACGTACGGTCANCGATGTCTGTATTACACGGCA CCGACTCGTACTGTCTGACCACTCTAGATAATACAGTACTGCGGTGACTC ATACGTCTCAGAGGAGACGAGTAGACGATCGATAACGCGACGCACGCGAA G	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXTAGACACAGAACCTGCAGGGATGGAGGGCTTACTGACACCG AATGTCCATAGTGAAGGGATGGTGGTGCATCTAGAAGAAGATATGCTCCT TGACAATGGAGAGGAATGGGCAACTCACACACACTGCAGTGTGAATATGA AACAGTTAGGTAGAAAAGCAAGCCATTTGGACTATGCAGTATGCTTTTAT TCACACAATGGTATATATAACGAAAACAGTGCCGATAGCAGATCAATGGT GTGATGGTTTGTATATTCTTGGACCAGGGAGTGGCACTATTTGGAGGTAT GGTCTTGTTGGAATAGGTGTGACCTGGTTGGAATAGGTGTGTCACTGTGG GCGCGGGCATAAGATCCTCACCCTAGTTGCCTGGAAGTCAGTCTTCCACT AGCAGCCTTTGAATGAAGACATAGAACTCAGCTCTGTCTGTACCATGCCT GTCTGGATGCTGCCGTGCTCCCCCCTTGATGATAATGGACTGAATCCCTT GACCCTGTTAGTCTCCCCCAATTAATTGGTGTTTTTTATCAGACCTGGCC TTACTCCTCCCCTCCTTATTTGTCGTCTTTTTTCAATTTTGTCTTTTCCT GTGTGCTTTTTCTTTGACCTAGCTTTTGTGTGGAACGTTTGCTCTTTGGG TTGGTGCCTCGTAGTCTTCGAATGTTTTCTTTTTGCTCGGTCCAGTTGGG CTTTTTGTTGCTGTCCCTCCTCCCTG
quality values	Open. Hide. 6 6 6 7 7 17 12 8 8 8 8 10 10 15 12 9 9 10 9 10 9 12 3 0 3 6 6 7 10 9 8 8 8 8 8 8 6 8 6 6 6 6 6 6 6 6 6 10 10 6 6 6 6 8 8 8 10 8 8 7 6 8 7 7 6 7 9 9 10 11 10 8 8 6 6 6 6 6 8 8 6 7 6 6 8 8 8 8 6 6 6 6 8 8 8 9 12 8 8 6 6 8 8 8 6 6 6 6 8 10 10 8 9 9 8 6 6 6 8 8 8 8 8 8 12 9 10 10 13 13 9 10 8 8 8 8 8 8 8 8 8 8 6 6 8 8 11 6 6 6 8 8 8 10 10 10 11 12 12 10 8 8 10 8 6 7 7 8 8 8 8 6 6 6 6 6 6 6 8 6 6 6 6 6 6 10 12 11 10 10 10 9 9 3 0 3 11 9 11 8 10 7 6 8 6 8 6 8 6 6 8 6 8 10 8 6 6 6 6 7 6 6 6 6 8 8 9 8 8 9 9 10 10 10 10 8 8 10 10 10 10 8 8 6 6 10 6 6 7 7 8 8 6 6 6 6 6 7 8 8 8 8 8 6 8 6 6 8 8 8 8 8 8 6 6 8 8 10 10 11 8 8 8 8 8 6 6 8 8 8 6 9 9 10 8 8 8 8 8 8 8 8 8 8 8 8 8 10 10 8 10 10 16 13 13 15 11 8 8 6 6 8 8 8 8 8 6 6 7 6 7 8 10 10 11 10 10 8 8 7 10 10 10 8 9 9 10 8 6 6 6 8 6 6 8 8 8 9 8 8 8 8 8 8 6 6 6 8 8 12 8 8 8 8 8 8 9 9 9 8 6 6 6 8 8 8 6 6 8 8 6 6 10 8 9 9 9 9 9 11 11 10 8 8 8 6 6 8 8 8 6 6 6 8 8 6 6 6 8 8 13 10 10 10 10 10 11 10 10 8 8 6 6 6 6 6 6 6 6 6 6 8 8 6 6 8 8 9 9 10 12 10 12 11 11 10 10 8 8 8 8 8 8 6 6 6 6 8 8 10 10 7 7 8 6 8 10 8 8 8 8 8 8 10 10 10 8 7 9 9 12 12 11 10 10 14 11 8 8 6 6 6 8 8 9 9 9 9 8 8 8 6 8 6 6 8 8 8 6 6 6 6 6 6 6 6 8 6 6 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 9 9 9 9 10 8 8 8 8 8 8 8 10 10 8 8 8 8 8 8 10 12 18 16 12 10 8 8 8 6 6 8 8 8 8 8 8 7 6 6 6 11 10 8 8 8 8 8 8 8 8 8 3 0 3 8 10 8 8 9 9 10 8 8 8 8 13 10 8 8 8 8 8 7 6 6 6 6 8 8 7 6 8 6 8 8 6 8 6 6 8 6 8 9 9 8 8 8 8 8 8 10 10 8 8 6 6 6 7 6 6 6 6 9 6 6 6 6 8 8 8 6 8 9 10 9 9 9 9 9 9 9 10 7 7 7 7 10 8 8 8 8 8 8 8 6 6 6 8 8 8 8 8 8 8 8 8 8 8 8 10 9 8 8 8 8 8 8 8 8 3 0 3 13 13 13 10 10 10 7 7 6 6 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 6 10 10 9 8 8 8 8 8 8 8 8 9 13 10 8 8 8 10 8 8 8 8 10 9 9 9 12 12 15 11 10 10 10 10 9 9 10 13 8 6 8 6 6 6 6 6 6 8 8 10 8 8 8 8 8 8 11 13 8 7 7 7 8 6 7 6 6 8 8 8 8 8 8 8 8 10 8 10 10 10 10 10 8 8 6 6 8 8 6 6 6 6 6 8 6 10 10 8 8 8 8 8 8 8 8 6 6 6 6 8 8 8 8 8 8 8 6 6 8 8 9 9 9 8 8 8 8 6 6 7 8 8 9 6 6 6 8 8 8 10 8 8 8 8 8 9 9 9 8 8 8 8 8 8 8 7 6 8 3 0 3 10 10 10 12 10 11 13 12 8 6 6 8 6 8 10 8 10 11 11 11 8 8 6 6 8 10 8 8 9 9 10 8 8 8 6 6 6 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 6 6 10 10 10 8 8 8 8 10 14 9 9 10 10 8 8 6 6 8 6 6 6 6 8 8 8 8 8 8 10 8 8 8 10 8 8 8 8 8 8 9 9 10 8 8 8 8 10 8 11 11 8 8 8 8 8 8 10 7 6 6 6 10 10 10 6 6 8 8 8 6 6 6 6 7 10 9 9 9 10 9 10 6 6 6 6 6 6 6 8 8 11 10 11 11 11 9 8 8 8 8 8 8 10 8 8 8 8 8 11 14 11 9 9 6 6 6 6 6 6 6 6 6 6 10 8 8 10 10 8 8 8 8 6 6 8 6 6 6 6 8 8 11 11 12 9 9 8 8 6 6 6 6 8 6 8 8 10 10 13 10 8 8 8 8 8 8 6 6 6 6 8 8 10 10 10 13 10 10 10 8 10 10 8 8 8 10 10 8 8 8 8 8 8 8 12 9 8 8 8 8 3 0 3 9 11 8 8 8 8 7 7 7 7 9 9 9 9 10 10 8 10 8 8 6 6 8 8 8 8 10 8 8 6 6 6 6 6 6 6 6 6 6 8 6 6 6 6 8 8 6 6 8 8 8 6 7 6 8 11 3 0 3 11 11 8 12 12 8 8 8 10 14 8 8 7 6 8 6 8 8 8 8 6 8 7 7 6 6 6 6 8 8 8 8 8 8 8 8 8 8 8 7 6 6 8 8 10 10 10 9 8 8 8 8 8 8 9 9 9 12 9 12 12 9 6 6 6 6 6 8 6 8 6 6 6 8 8 8 8 8 8 8 8 8 6 6 7 7 8 6 8 8 8 8 9 10 9 10 8 9 9 9 9 11 8 8 8 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8	Open. Hide. 28 28 39 39 39 37 37 44 37 37 44 44 39 25 25 11 9 9 11 11 9 10 10 15 15 25 20 34 34 34 37 41 32 33 33 37 33 33 44 44 37 40 34 27 19 10 15 10 10 11 13 16 23 18 33 33 33 33 36 47 53 36 36 36 36 37 37 37 47 57 57 57 53 53 53 53 53 51 51 43 47 47 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 51 50 50 50 51 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 50 50 51 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 48 48 48 48 48 48 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 68 57 57 57 57 57 59 57 57 68 68 68 68 68 59 59 57 57 57 57 57 68 68 57 59 59 57 57 59 59 59 68 68 68 44 44 36 32 35 35 35 43 43 59 59 59 59 57 57 68 57 57 57 68 51 51 51 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 59 57 59 59 54 54 54 59 57 57 57 68 68 68 68 68 68 57 57 57 57 57 57 48 48 48 48 48 59 59 59 59 48 48 48 59 47 38 36 36 33 33 39 42 41 30 30 14 12 11 11 11 11 11 15 11 19 19 30 29 43 43 43 43 48 48 48 48 48 48 32 41 20 20 20 41 32 37 37 36 31 27 32 30 30 35 39 39 36 30 20 22 18 16 12 22 18 27 22 39 39 37 32 28 11 17 19 20 20 17 28 28 28 28 30 36 37 35 25 25 17 22 18 23 20 25 23 18 13 16 12 16 14 10 10 10 17 20 25 30 25 25 27 28 37 37 25 28 13 13 13 28 26 36 25 16 12 11 14 11 19 15 11 11 10 10 10 13 16 23 19 11 12 13 12 10 10 13 10 12 8 8 6 6 6 6 10 17 19 23 22 9 9 8 8 8 9 9 14 17 18 17 10 8 8 8 8 8 12 12 11 11 11 11 12 16 15 14 14 11 10 9 8 8 8 8 8 11 12 18 18 18 11 10 10 8 8 8 8 8 8 8 8 8 8 8 10 10 8 8 8 8 8 7 8 8 8 8 8 8 8 8 8 8 11 11 10 10 10 8 6 6 8 8 8 8 10 10 14 14 13 13 12 15 15 12 15 15 15 11 12 11 15 15 10 10 10 8 8 8 9 10 10 10 11 16 12 11 10 10 8 6 6 6 6 6 6 9 9 10 11 13 9 9 9 11 9 9 8 8 6 6 8 8 10 10 13 10 9 9 9 8 8 8 10 8 13 7 7 8 8 9 10 10 8 8 10 10 8 8 8 8 10 12 13 10 9 9 9 8 8 8 8 8 8 14 16 15 15 18 16 15 11 11 11 10 10 10 10 10 9 11 13 10 10 10 8 8 8 8 10 8 9 9 9 9 9 9 9 8 8 10 10 8 8 9 14 12 9 9 8 8 6 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no382_j12.g1 MSMg01no382_j12.g1 CHROMAT_FILE:
MSMg01no382_j12.g1 PHD_FILE: MSMg01no382_j12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:23 2005
         (342 letters)



>mm_chr12_72018114_72018855
          Length = 742

 Score =  661 bits (342), Expect = 0.0
 Identities = 342/342 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   tagacacagaacctgcagggatggagggcttactgacaccgaatgtccatagtgaaggga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tagacacagaacctgcagggatggagggcttactgacaccgaatgtccatagtgaaggga 381

                                                                       
Query: 61  tggtggtgcatctagaagaagatatgctccttgacaatggagaggaatgggcaactcaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tggtggtgcatctagaagaagatatgctccttgacaatggagaggaatgggcaactcaca 321

                                                                       
Query: 121 cacactgcagtgtgaatatgaaacagttaggtagaaaagcaagccatttggactatgcag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cacactgcagtgtgaatatgaaacagttaggtagaaaagcaagccatttggactatgcag 261

                                                                       
Query: 181 tatgcttttattcacacaatggtatatataacgaaaacagtgccgatagcagatcaatgg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tatgcttttattcacacaatggtatatataacgaaaacagtgccgatagcagatcaatgg 201

                                                                       
Query: 241 tgtgatggtttgtatattcttggaccagggagtggcactatttggaggtatggtcttgtt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tgtgatggtttgtatattcttggaccagggagtggcactatttggaggtatggtcttgtt 141

                                                     
Query: 301 ggaataggtgtgacctggttggaataggtgtgtcactgtggg 342
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 ggaataggtgtgacctggttggaataggtgtgtcactgtggg 99


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space:   244089
Effective search space used:   244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information