XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTA
AGTTCTCAGTATTTATTAGAAGATACATTAATGGCTGGATGGCATATAAT
TTTGTCAAACAAATCACAACCAAATAACCGAAAAATCCATGTGGTTCTTA
AATTTCTTTCACTAAATAGGAAGAGAAATATAGATGTTATATGAGTAACA
AATATAGTATAAATATGGGTTGAGAATTTTTTATTAGATATTTTCTTTAC
TTACATTTCAAATGTTATCCCCTTTCCTAGTTTCCCTCTGAAAACCCCCT
CCCCCTGCTCACCAAACCACCTACTCCTGCTTCCTGGCCCTGGCATTCCA
CTATAATGGAGCATAGAACTTTCACAGAATCAAGGGCCTCTCCTCCCATT
GATGCCCATCTAGGCCATCCTCTGTCACATATGCAGCTAGAGCCATGAGT
CCCAGCATGTGTTTCCTTTGGTTGGTGGTTTAGTCCCAGGGAGCTCTGGA
GTTACTAGTTAGTTCATGTTGTGGTTTCTCCTATAATTAAATATACTATT
GGATATGTGATTGGAACTTTCCAGAAGAATGGATGAGTACAGAAGACATA
CTCTGAATTCATGGCACGGGGGTAAAAATATTAAATTCCACCCCCGGAAC
ACTACTGTAGAATAAAAGGATCCCGCGTGGGGTTGTTGGGGGTTTTTCCC
CCCACTTTTCCCTTTCCTTCCTTCTCCTATTCCCCTCTTCCTG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXTTACGGTAAGAGATTTGGAACCTGAAGTGGCCACTG
CCTGTAGCCAGGCAGGACTCCTCCTAGTAGAGGTATAAGAATAGCAACCC
ACCCCTTCTCCTCTGAGAGACTCTGCACATCATCTAATGGAAAGAAATGC
AGAGACCCATATCCACACATTAGATGGAGCTCTAGGAGTCTTATGGAAGA
GTTTGGTAGAATAACTAATGGGCCCAGGATGGATACAGATCCACAAGAAG
ATTGGCAGACTCACCTAAGCTAGCATTGGCAGCTTCCAGAATTAGAACCA
CAAACCAAAGAGCAAGTATGCACTGGACCCAGACCCCCAGCACATATGTT
GTAGATGTGCAATATGGTCTACATGCACACACACACAGCCAACAACTGGA
GTAGGGGCTGTTCCTGAGCCTGTACTAACCTCAATGAAGAGGAAGCACCT
AATCCTGTAGTGACTTGATTTTGGCAGGGTGGAGTGATACCTAGGGGGAC
TTTCCCTTCTCAAAGGAGAAGGGGAGGAGGAAGGGCTTTGTGTGGAGGGA
CTGATAGGAGAAGATATTGTCAGGATATTGGATATCAGGTGTATTTTTTT
CTTATGGTTCTTTTTATTTTGTTATCGGTTTTTCTTGGATATTTGACCCC
CTTTTTTCCCTTTATTTTTTTATCTG

Query= MSMg01no384_i06.b1 MSMg01no384_i06.b1 CHROMAT_FILE:
MSMg01no384_i06.b1 PHD_FILE: MSMg01no384_i06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:50 2005
         (478 letters)



>mm_chr12_94413770_94414647
          Length = 878

 Score =  890 bits (460), Expect = 0.0
 Identities = 472/476 (99%), Gaps = 1/476 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcttaagttctcagtatttattagaagatacattaatggctggatggcatataat 63
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttaagtactcagtatttattagaagatacattaatggctggatggcatataat 263

                                                                       
Query: 64  tttgtcaaacaaatcacaaccaaataaccgaaaaatccatgtggttcttaaatttctttc 123
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 264 tttgtcaaacaaatcacaaccaaataacagaaaaatccatgtggttcttaaatttctttc 323

                                                                       
Query: 124 actaaataggaagagaaatatagatgttatatgagtaacaaatatagtataaatatgggt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 actaaataggaagagaaatatagatgttatatgagtaacaaatatagtataaatatgggt 383

                                                                       
Query: 184 tgagaattttttattagatattttctttacttacatttcaaatgttatcccctttcctag 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgagaattttttattagatattttctttacttacatttcaaatgttatcccctttcctag 443

                                                                       
Query: 244 tttc-cctctgaaaaccccctccccctgctcaccaaaccacctactcctgcttcctggcc 302
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tttctcctctgaaaaccccctccccctgctcaccaaaccacctactcctgcttcctggcc 503

                                                                       
Query: 303 ctggcattccactataatggagcatagaactttcacagaatcaagggcctctcctcccat 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctggcattccactataatggagcatagaactttcacagaatcaagggcctctcctcccat 563

                                                                       
Query: 363 tgatgcccatctaggccatcctctgtcacatatgcagctagagccatgagtcccagcatg 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgatgcccatctaggccatcctctgtcacatatgcagctagagccatgagtcccagcatg 623

                                                                   
Query: 423 tgtttcctttggttggtggtttagtcccagggagctctggagttactagttagttc 478
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 624 tgtttcctttggttggtggtttagtcccagggagctctggagttactggttagttc 679


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 878
Length adjustment: 10
Effective length of query: 468
Effective length of database: 868
Effective search space:   406224
Effective search space used:   406224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)