Query= MSMg01no387_e04.b1 MSMg01no387_e04.b1 CHROMAT_FILE:
MSMg01no387_e04.b1 PHD_FILE: MSMg01no387_e04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:16 2005
(466 letters)
>mm_chr12_119998912_119999774
Length = 863
Score = 864 bits (447), Expect = 0.0
Identities = 455/459 (99%), Gaps = 3/459 (0%)
Strand = Plus / Minus
Query: 1 tggtgtggtcagaggacaagttctctctatcaaagccttgccccctttcatccccacaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tggtgtggtcagaggacaagttctctctatcaaagccttgccccctttcatccccacaat 553
Query: 61 ggaacccagctttttcttctatggtttctcagatgagcagaatgttaatattgaaaggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ggaacccagctttttcttctatggtttctcagatgagcagaatgttaatattgaaaggga 493
Query: 121 aggtaattccaagagacaatgaaaaaagaaattaccttaaaataggtttgctctttaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 aggtaattccaagagacaatgaaaaaagaaattaccttaaaataggtttgctctttaata 433
Query: 181 ataaaatattccttatgagacaatccaaatctccttgctacactatttgccagggtctta 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 432 ataaaatattccttatgagacaatccaaat---cttgctacactatttgccagggtctta 376
Query: 241 atatctataaattgtaacgttaaaccacaagaatatagttaactagaaagtgttattttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 atatctataaattgtaacgttaaaccacaagaatatagttaactagaaagtgttattttt 316
Query: 301 ctattatgcaacaatattatacatgtaatcttcgtgaccaagagcaagctcacaaggcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ctattatgcaacaatattatacatgtaatcttcgtgaccaagagcaagctcacaaggcaa 256
Query: 361 ctgacgatatagttaaaaatctatgtagcatggatacaattattttcatgaccaggaact 420
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ctgaggatatagttaaaaatctatgtagcatggatacaattattttcatgaccaggaact 196
Query: 421 gactacagactgtacagtgtattccaggttcccagcttc 459
|||||||||||||||||||||||||||||||||||||||
Sbjct: 195 gactacagactgtacagtgtattccaggttcccagcttc 157
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 863
Length adjustment: 10
Effective length of query: 456
Effective length of database: 853
Effective search space: 388968
Effective search space used: 388968
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no387_e04.g1 MSMg01no387_e04.g1 CHROMAT_FILE:
MSMg01no387_e04.g1 PHD_FILE: MSMg01no387_e04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:16 2005
(411 letters)
>mm_chr12_119836735_119837545
Length = 811
Score = 770 bits (398), Expect = 0.0
Identities = 407/410 (99%)
Strand = Plus / Plus
Query: 1 tttgccattaatcacttagctattttagttggtttatgtgttagttggtggcagcagaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgccattaatcacttagctattttagttggtttatgtgttagttggtggcagcagaga 260
Query: 61 aatgaaatatgtcactcctatggcgttggctgtgacttgaatgtaaacatggggacctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatgaaatatgtcactcctatggcgttggctgtgacttgaatgtaaacatggggacctgt 320
Query: 121 gactccagctctggttatagtcatctcatcctgtgcccctcattgaatgatggattcatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gactccagctctggttatagtcatctcatcctgtgcccctcattgaatgatggattcatc 380
Query: 181 agttcagtaaacgtccagaaggtgttcaccaatcactctctgctagatgtgccgctgggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agttcagtaaacgtccagaaggtgttcaccaatcactctctgctagatgtgccgctgggt 440
Query: 241 ggtagtgagcggtagaaagagaaacaacgtgtaaataaatagaagcaagttaacttttat 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtagtgagctgtagaaagagaaacaacgtgtaaataaatagaagcaagttaacttttat 500
Query: 301 tttgaatggaggtgactaccactatgtgttcaaaagtgtgtgttaggaaacccacatttc 360
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttgaatggaggtgactaccacgatgtgttcaaaagtgtgtgttaggaaacccacatttc 560
Query: 361 acagtctgtggattacgagagaaggggactgagtgaagatgctatagcag 410
||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 561 acagtctgtggattatgagagaaggggactgagtgaagatgctatagcag 610
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space: 322404
Effective search space used: 322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
