Query= MSMg01no389_l17.b1 MSMg01no389_l17.b1 CHROMAT_FILE:
MSMg01no389_l17.b1 PHD_FILE: MSMg01no389_l17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:26 2005
(314 letters)
>mm_chr12_32169590_32170308
Length = 719
Score = 586 bits (303), Expect = e-172
Identities = 313/319 (98%), Gaps = 5/319 (1%)
Strand = Plus / Minus
Query: 1 aatgtaaaaaccattatgctgggaggcaggccagatgaatgttttgtaatagaattttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 aatgtaaaaaccattatgctgggaggcaggccagatgaatgttttgtaatagaattttaa 460
Query: 61 ttgttagac-----ttcatcagttaattgtttgaatgagggtgggtgggtagacagataa 115
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ttgttagacttcagttcatcagttaattgtttgaatgagggtgggtgggtagacagataa 400
Query: 116 caggattattattaagtgtttctgttcttaaggaaaaagatgtgaatcccagcacatttc 175
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 caagattattattaagtgtttctgttcttaaggaaaaagatgtgaatcccagcacatttc 340
Query: 176 agggaagccttcgaagctatctatgatggacataagtctaaatgtatgtatgtttcatta 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 agggaagccttcgaagctatctatgatggacataagtctaaatgtatgtatgtttcatta 280
Query: 236 attgctcttaagactactgaggtggcagtttaattctttaaaacaataaaatggaagcat 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 attgctcttaagactactgaggtggcagtttaattctttaaaacaataaaatggaagcat 220
Query: 296 aaatactattttgcctaga 314
|||||||||||||||||||
Sbjct: 219 aaatactattttgcctaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 719
Length adjustment: 9
Effective length of query: 305
Effective length of database: 710
Effective search space: 216550
Effective search space used: 216550
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no389_l17.g1 MSMg01no389_l17.g1 CHROMAT_FILE:
MSMg01no389_l17.g1 PHD_FILE: MSMg01no389_l17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:26 2005
(441 letters)
>mm_chr12_31987418_31988258
Length = 841
Score = 770 bits (398), Expect = 0.0
Identities = 419/426 (98%)
Strand = Plus / Plus
Query: 15 gggggattccctggctttcaaaagcagaattctgctccgaaccggatggcatgagccctg 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 gggggattccctggctttcaaaagcagaattctgctccgaaccggatggcatgagccctg 274
Query: 75 aggcacagtgaatgtggctgggcacaggtgacggcacgtctgtctagctaatgagttttt 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aggcacagtgaatgtggctgggcacaggtgacggcacgtctgtctagctaatgagttttt 334
Query: 135 gtttgctttgtctgcagcttgtgactgccatctgcaagggtctgccagtgccttctgtga 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 335 gtttgctttgtctgcagcttgtgactgccatctgcaagggtctgccagtgccttctgcga 394
Query: 195 cgcgatcactggccagtgccactgtttccagggcatctatgctcggcagtgtgatttatg 254
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 395 tgcgatcactggccagtgccactgtttccagggcatctatgctcggcagtgtgaccgatg 454
Query: 255 tctccctgggtattggggctttcccagctgccagccctgccagtgtaatggtcatgctct 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tctccctgggtattggggctttcccagctgccagccctgccagtgtaatggtcatgctct 514
Query: 315 agactgtgacacagtgacaggggagtgtctgagctgtcaggactacaccacgggccacaa 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 agactgtgacacagtgacaggggagtgtctgagctgtcaggactacaccacgggccacaa 574
Query: 375 ctgcgaaaggtatgtgggcactacctcgggaaagtcaagataatagagtaggcatggtga 434
||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 575 ctgcgaaaggtatgtgggcaccacctcgggaaagtcaagataatagagtaggcatgttga 634
Query: 435 ctcgtg 440
||||||
Sbjct: 635 ctcgtg 640
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space: 359424
Effective search space used: 359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
