Query= MSMg01no390_h24.b1 MSMg01no390_h24.b1 CHROMAT_FILE:
MSMg01no390_h24.b1 PHD_FILE: MSMg01no390_h24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:26 2005
(351 letters)
>mm_chr12_44213194_44213943
Length = 750
Score = 640 bits (331), Expect = 0.0
Identities = 346/351 (98%), Gaps = 1/351 (0%)
Strand = Plus / Plus
Query: 1 agtaacttgctttggctttaattaggagtaagataatctatatattgagttacaaataat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtaacttgctttggctttaattaggagtaagataatctatatattgagttacaaataat 260
Query: 61 ggaaattttaagtaattagttttacaatcaatgaaccaagaatttctctctatttagatc 120
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 261 ggaaattttaagtaattagttttacaatcaatgaaccaagagtttctctccatttagatc 320
Query: 121 tttgatcaattagttcaagcattacagtgtactttgttaaattcatatacatttcatctt 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttgataaattagttcaagcattacagtgtactttgttaaattcatatacatttcatctt 380
Query: 181 tgtctccattgcatgaattgctatagttttatttccaattccatttctttatcagagaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtctccattgcatgaattgctatagttttatttccaattccatttctttatcagagaga 440
Query: 241 tgatggagtataattaacttgtttcttttttttttataatgttctatatttagttagttc 300
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 441 tgatggagtataattaacttgtttcttttttttt-ataatgttctatatttagttagttc 499
Query: 301 taggaaaactctgtaaattcttgtacattttgtatagagaaaaaactatca 351
|||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 500 taggaaaactctgtaaattcttgtacattttgtatagagaaagaactatca 550
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 351
Length of database: 750
Length adjustment: 9
Effective length of query: 342
Effective length of database: 741
Effective search space: 253422
Effective search space used: 253422
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no390_h24.g1 MSMg01no390_h24.g1 CHROMAT_FILE:
MSMg01no390_h24.g1 PHD_FILE: MSMg01no390_h24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:26 2005
(408 letters)
>mm_chr12_44390930_44391734
Length = 805
Score = 768 bits (397), Expect = 0.0
Identities = 404/407 (99%), Gaps = 3/407 (0%)
Strand = Plus / Minus
Query: 1 tggataaatatgcttcaatttcttttgttgttctggttcatctaatgctatcagtaagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 tggataaatatgcttcaatttcttttgttgttctggttcatctaatgctatcagtaagcc 545
Query: 61 cttgggcctcttgccctctacagcagtgaccatgatgtataaaattgtaacaataaagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 cttgggcctcttgccctctacagcagtgaccatgatgtataaaattgtaacaataaagag 485
Query: 121 ttgaattttagaaacaaatgaactgattatcaattttagctttgtacaactcctggaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ttgaattttagaaacaaatgaactgattatcaattttagctttgtacaactcctggaaat 425
Query: 181 tagttagcttccatgtgtttagtttcctgcccaataaagtgaaaataataactctttgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tagttagcttccatgtgtttagtttcctgcccaataaagtgaaaataataactctttgta 365
Query: 241 ctgccctactttttctatgaggattaacaaaggtaacaagataagaaaaatcgagatcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ctgccctactttttctatgaggattaacaaaggtaacaagataagaaaaatcgagatcaa 305
Query: 301 cataccttaaattagtggtagcacagactttataattcttgacaacttttttgatcgtta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 cataccttaaattagtggtagcacagactttataattcttgacaacttttttgatcgtta 245
Query: 361 aaaattcatttctctggnttctgtcccatcatttttgatatataatt 407
|||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 244 aaaattcatttctctg--ttctgtcccatca-ttttgatatataatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 408
Length of database: 805
Length adjustment: 9
Effective length of query: 399
Effective length of database: 796
Effective search space: 317604
Effective search space used: 317604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
