Query= MSMg01no391_c24.b1 MSMg01no391_c24.b1 CHROMAT_FILE:
MSMg01no391_c24.b1 PHD_FILE: MSMg01no391_c24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:19 2005
(307 letters)
>mm_chr12_7392810_7393516
Length = 707
Score = 547 bits (283), Expect = e-160
Identities = 301/307 (98%), Gaps = 1/307 (0%)
Strand = Plus / Plus
Query: 1 tggatttcctttctaaagacttacagtaacacatgaatagattctgcctgtaatacccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggatttcctttctaaagacttacagtaacacatgaatagattctgcctgtaatacccat 260
Query: 61 tctagacatctgattagtgacgatactttatcttgttttaaaattaagtgttttacccat 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctagacatctgattagtgaagatactttatcttgttttaaaattaagtgttttacccat 320
Query: 121 tatgtctgtgttggatatcaattcatgtcaaattgatacaagatagagtcatcagaaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatgtctgtgttggatatcaattcatgtcaaattgatacaagatagagtcatcagaaagg 380
Query: 181 caggaaccacaatttaaaaatgcgtttacaaaactgagctgtagagtaagcctgtagagc 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 caggaaccacaatttaaaaatgtgtttacaaaactgagctgtagagtaagcctgtagagc 440
Query: 241 agtttcttaattattggtcaatgggggggggtgggttcaacccattgcatgcagtgccat 300
||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||||
Sbjct: 441 agtttcttaattagtggtcaatggggggggg-gggttcaacccattgcaggcagtaccat 499
Query: 301 ccctagc 307
|||||||
Sbjct: 500 ccctagc 506
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 307
Length of database: 707
Length adjustment: 9
Effective length of query: 298
Effective length of database: 698
Effective search space: 208004
Effective search space used: 208004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no391_c24.g1 MSMg01no391_c24.g1 CHROMAT_FILE:
MSMg01no391_c24.g1 PHD_FILE: MSMg01no391_c24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:19 2005
(377 letters)
>mm_chr12_7607055_7607831
Length = 777
Score = 683 bits (353), Expect = 0.0
Identities = 371/377 (98%)
Strand = Plus / Minus
Query: 1 ccccaataaccacaaaccactgaagaaacacaaggatttaatttaaatgctgccaggaca 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 ccccaataaccacaagccactgaagaaacacaaggatttaatttaaatgctgccaggaca 518
Query: 61 ttctcttctagaaaccagggtggcagatgcttaataaatggtgattgttagtatttattt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 517 ttctcttctagaaaccagggtggcagatgcttaataaatggtgattgttagtatttatgt 458
Query: 121 atttatttttctgcggaagtggctaacagaaatgtctattgagcttggacaggtgtaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 atttatttttctgcggaagtggctaacagaaatgtctattgagcttggacaggtgtaatt 398
Query: 181 actcagcagacttgacacaatacctagaaattctctttgatcatacagttttaaagagaa 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 actcagcacacttgacacaatacctagaaattctctttgatcatacagttttaaagagaa 338
Query: 241 agcatccatcattttctagtttgtgagttccctgtgggcagtgggtactctaggtctctt 300
||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 agcatccatcaggtactagtttgtgagttccctgtgggcagtgggtactctaggtctctt 278
Query: 301 gctccctatgcttcagagctctgttctagacagtcgatgtttaatgaatatttgtagttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gctccctatgcttcagagctctgttctagacagtcgatgtttaatgaatatttgtagttg 218
Query: 361 atgtattctaagtgggc 377
|||||||||||||||||
Sbjct: 217 atgtattctaagtgggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 777
Length adjustment: 9
Effective length of query: 368
Effective length of database: 768
Effective search space: 282624
Effective search space used: 282624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
