NNNAACTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAAAGACGATC
CGCGGAATTCCAGATTTTCTCAGGCACCTTGTCTCAAAGAATAAGGTTGA
GTATATCGGCCGAAAGGCTAAACATAAATGCAACCAAGCCCGGTTCAATC
CCAAGGACCACATGGTAGAAGAGGAGAAGTGACTCCCACAAACTGTCCTT
TGACCTCTGCACATGCAGCATGGCATGTGTGCACCACCCTCATACAAAAC
CGTAAACACAACAGGAAGAAGAAAAGGGGCGGAGAACTAGAGCAAGAGAC
CGGATATCAATCCGGCTTCCATACTCATGTGCACACATAGTAACATGTAC
TCACACTCACACACATATATGTGCATGCATCACACACTCACAACAACTGT
TACACTTAAAAAGACTGAAATTACTCATTAATGTAAGCAAATATTAGGTA
GTGTTCACAAGCTATGGCATTCACAAAACTGCTAAGGATGTGCACAATAT
CGAAGATGTCCAAAGGCATCTCTTAAGCACGCTCTCAGGACAAACATAAG
CTATATCTAGGAGAAATTCCATAAATTTCTTCTGCCAACACGTCTCAGGT
GAGGCTTGTCTCTCACCCTCCAGAACCTCTTCCTAAAGTGCGTGCACCCC
CTTCCGGAAACAAGACCGCCAGGGGAATTCCCCCGAAAAAGACCAGGACC
CCAGAACCGTCCCCCCGTTTTTACCCGCTCCCTAAAAAAAACGCCGAAAA
AACACCTTTTAAAAGGGCCCCACCGCTAGAC

NCGATGATATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCAGGTATCATTTGTAGCTCGGCTTC
CTAGCCAATACAGATTGAGAGTCGAGTGTGGTTTTTTGCCTGTTTGCTTT
TTCTACTTGTATTATATTTGATGCTGATGTTGTGAATAATTTGAGTCATT
CAGAAAAGAGTGTGGAAAGGTCTTGGGAAGCTTGACCAACAGCTTTCAGC
ATGAGATTTCCTTTCCCTGCAGAAAATCCCCTCTCTATGATAACTGCTTC
CTCCAAGCTCCTGATGGACAGCCCTTGTGCACCTGTGACCGCAGGAAAGC
TCAGTGGTACCTGGACAAAGGCATTGGAGGTGTGAGACTCGTCTGCCATG
CTTGTTTATACATAGGGTCTTGTTGTGAGTAGGGTGTGGAAGAGGTAGAC
TGCTTGAACATCCCCATGCTTTGACATGTTCCCTCTGGTTATTCCTAAAT
TGCAGCCCTCTGTTTGGTCCCTTATAACTTTTGTTTATCATAAGTTTCTT
CCCACCGCCCCTACTCTTTATCTTCTCCCCTTTCCTACACCTGTTCACCC
TTCTTACCTTTTTTGCCTCCCTTTCCCCTCCCCTCCCCTTTTTACCCTCT
GTCCCTCTCCAACCTTCTCTCTGCCCCCTCTCTACTTTTTTCCCCGTTTC
CCTCCTTCCTTTCCCTACTCTACCCCTCTTATTCTCTCCCTCCTTCCCCC
CTTTCTCCCCCCCTTTTTACCCTTTTAC

Query= MSMg01no392_h22.b1 MSMg01no392_h22.b1 CHROMAT_FILE:
MSMg01no392_h22.b1 PHD_FILE: MSMg01no392_h22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:02 2005
         (426 letters)



>mm_chr12_81763310_81764135
          Length = 826

 Score =  822 bits (425), Expect = 0.0
 Identities = 425/425 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   ccttgtctcaaagaataaggttgagtatatcggccgaaaggctaaacataaatgcaacca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 ccttgtctcaaagaataaggttgagtatatcggccgaaaggctaaacataaatgcaacca 736

                                                                       
Query: 61  agcccggttcaatcccaaggaccacatggtagaagaggagaagtgactcccacaaactgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 agcccggttcaatcccaaggaccacatggtagaagaggagaagtgactcccacaaactgt 676

                                                                       
Query: 121 cctttgacctctgcacatgcagcatggcatgtgtgcaccaccctcatacaaaaccgtaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 cctttgacctctgcacatgcagcatggcatgtgtgcaccaccctcatacaaaaccgtaaa 616

                                                                       
Query: 181 cacaacaggaagaagaaaaggggcggagaactagagcaagagaccggatatcaatccggc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 cacaacaggaagaagaaaaggggcggagaactagagcaagagaccggatatcaatccggc 556

                                                                       
Query: 241 ttccatactcatgtgcacacatagtaacatgtactcacactcacacacatatatgtgcat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 ttccatactcatgtgcacacatagtaacatgtactcacactcacacacatatatgtgcat 496

                                                                       
Query: 301 gcatcacacactcacaacaactgttacacttaaaaagactgaaattactcattaatgtaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gcatcacacactcacaacaactgttacacttaaaaagactgaaattactcattaatgtaa 436

                                                                       
Query: 361 gcaaatattaggtagtgttcacaagctatggcattcacaaaactgctaaggatgtgcaca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gcaaatattaggtagtgttcacaagctatggcattcacaaaactgctaaggatgtgcaca 376

                
Query: 421 atatc 425
           |||||
Sbjct: 375 atatc 371


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 826
Length adjustment: 9
Effective length of query: 417
Effective length of database: 817
Effective search space:   340689
Effective search space used:   340689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no392_h22.g1 MSMg01no392_h22.g1 CHROMAT_FILE:
MSMg01no392_h22.g1 PHD_FILE: MSMg01no392_h22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:02 2005
         (362 letters)



>mm_chr12_81591371_81592132
          Length = 762

 Score =  685 bits (354), Expect = 0.0
 Identities = 360/362 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   caggtatcatttgtagctcggcttcctagccaatacagattgagagtcgagtgtggtttt 60
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggtatcatttgtagctctgcttcctagccaatacagattgagagtcgagtgtggtttt 260

                                                                       
Query: 61  ttgcctgtttgctttttctacttgtattatatttgatgctgatgttgtgaataatttgag 120
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 ttgcctgtttgctttttctacttgtattatatttgatactgatgttgtgaataatttgag 320

                                                                       
Query: 121 tcattcagaaaagagtgtggaaaggtcttgggaagcttgaccaacagctttcagcatgag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcattcagaaaagagtgtggaaaggtcttgggaagcttgaccaacagctttcagcatgag 380

                                                                       
Query: 181 atttcctttccctgcagaaaatcccctctctatgataactgcttcctccaagctcctgat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atttcctttccctgcagaaaatcccctctctatgataactgcttcctccaagctcctgat 440

                                                                       
Query: 241 ggacagcccttgtgcacctgtgaccgcaggaaagctcagtggtacctggacaaaggcatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggacagcccttgtgcacctgtgaccgcaggaaagctcagtggtacctggacaaaggcatt 500

                                                                       
Query: 301 ggaggtgtgagactcgtctgccatgcttgtttatacatagggtcttgttgtgagtagggt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggaggtgtgagactcgtctgccatgcttgtttatacatagggtcttgttgtgagtagggt 560

             
Query: 361 gt 362
           ||
Sbjct: 561 gt 562


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 362
Length of database: 762
Length adjustment: 9
Effective length of query: 353
Effective length of database: 753
Effective search space:   265809
Effective search space used:   265809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)