Query= MSMg01no392_i16.b1 MSMg01no392_i16.b1 CHROMAT_FILE:
MSMg01no392_i16.b1 PHD_FILE: MSMg01no392_i16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:06 2005
(368 letters)
>mm_chr12_71153898_71154665
Length = 768
Score = 563 bits (291), Expect = e-165
Identities = 309/321 (96%), Gaps = 10/321 (3%)
Strand = Plus / Minus
Query: 48 gaaattaaaattcttagccatctgccctcagtaccactctttaagtcatgttggtgttct 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 gaaattaaaattcttagccatctgccctcagtaccactctttaagtcatgttggtgttct 709
Query: 108 gaaataatatacatatctgtgttttccagtggtccctgtgaaagggtcattcaattccca 167
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 708 gaaataatatacatatctgtgttttccagtggcccctgtgaaagggtcattcaattccca 649
Query: 168 aaggggtcacgaccaacaggttaagagtcactgctctaacctcggctccttccagtgccc 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 aaggggtcacgaccaacaggttaagagtcactgctctaacctcggctccttccagtgccc 589
Query: 228 cgcccctcccctcccctcccctcccctcccactgcacctcccgtgagccccctgttcctc 287
|| |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 588 cg----------cccctcccctcccctcccactgcaactcccgtgagccccctgttcctc 539
Query: 288 ctgtgtgctcctttgtcatgtccccaacaccacaggccatcttccctttccattcccatt 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ctgtgtgctcctttgtcatgtccccaacaccacaggccatcttccctttccattcccatt 479
Query: 348 acaccccctttcctgttcggc 368
|||||||||||||||||||||
Sbjct: 478 acaccccctttcctgttcggc 458
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no392_i16.g1 MSMg01no392_i16.g1 CHROMAT_FILE:
MSMg01no392_i16.g1 PHD_FILE: MSMg01no392_i16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:06 2005
(245 letters)
>mm_chr12_70945963_70946607
Length = 645
Score = 474 bits (245), Expect = e-138
Identities = 245/245 (100%)
Strand = Plus / Plus
Query: 1 acctttaagagagaaaggtcaacttgcccctgaatatatgtgcagtgtatgtgtgtgaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acctttaagagagaaaggtcaacttgcccctgaatatatgtgcagtgtatgtgtgtgaat 260
Query: 61 gttcacccccgcacatgtgtgcagtgtttacctttcacatgtgtacaatgtatgagagtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttcacccccgcacatgtgtgcagtgtttacctttcacatgtgtacaatgtatgagagtc 320
Query: 121 tgcttgccctgtgcatgtgtgcagagggctgtcttcctttactgttctccatcttctttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcttgccctgtgcatgtgtgcagagggctgtcttcctttactgttctccatcttctttt 380
Query: 181 gggggacagggtctcacatggaacccggagctttgttttgtctagaaaggctgcccagta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggggacagggtctcacatggaacccggagctttgttttgtctagaaaggctgcccagta 440
Query: 241 aaact 245
|||||
Sbjct: 441 aaact 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
