Query= MSMg01no394_a20.b1 MSMg01no394_a20.b1 CHROMAT_FILE:
MSMg01no394_a20.b1 PHD_FILE: MSMg01no394_a20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:17 2005
(426 letters)
>mm_chr12_31872492_31873317
Length = 826
Score = 777 bits (402), Expect = 0.0
Identities = 417/422 (98%)
Strand = Plus / Plus
Query: 5 gaattctattacaatgctacttccagactctaatggaatggttcttgagtagtagaaatg 64
||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 205 gaattctattacaatgctacttccagactctaacggaatggttcttcagtagtagaaatg 264
Query: 65 tatctgtttaattatcccaactgccaaatagctagtgttgattggatattacagctcgcc 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 265 tatctgtttaattatcccaactgccaaatagctagtgttgattggatattacagttcgcc 324
Query: 125 ctagtaatgacctagagtaagttttgtttgtagaaaaagttcaaattgcttggttgaaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctagtaatgacctagagtaagttttgtttgtagaaaaagttcaaattgcttggttgaaat 384
Query: 185 tgcatttttgaatgtttgtgggaatattctaatttcatggtttaattatcacactcgccc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgcatttttgaatgtttgtgggaatattctaatttcatggtttaattatcacactcgccc 444
Query: 245 tagagagttttgccagaacttcggcccagttgcttacatactaccttattggcttcttga 304
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 445 tagagagttttgccagaacttgggcccagttgcttacatattaccttattggcttcttga 504
Query: 305 ctgcaagaagagttaaaggttttcacagagaccctacagcctcaaggccaaatatactca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctgcaagaagagttaaaggttttcacagagaccctacagcctcaaggccaaatatactca 564
Query: 365 ctatctagccataactgggcagtgtgtgaacctctgagttaatgagttatatacttaagt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctatctagccataactgggcagtgtgtgaacctctgagttaatgagttatatacttaagt 624
Query: 425 tt 426
||
Sbjct: 625 tt 626
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 826
Length adjustment: 9
Effective length of query: 417
Effective length of database: 817
Effective search space: 340689
Effective search space used: 340689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no394_a20.g1 MSMg01no394_a20.g1 CHROMAT_FILE:
MSMg01no394_a20.g1 PHD_FILE: MSMg01no394_a20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:17 2005
(396 letters)
>mm_chr12_32052513_32053304
Length = 792
Score = 708 bits (366), Expect = 0.0
Identities = 387/396 (97%), Gaps = 4/396 (1%)
Strand = Plus / Minus
Query: 1 agacacagggctgcccaaggcaggacacttcaccaatccagctttctttgacctcctgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 agacacagggctgcccaaggcaggacacttcaccaatccagctttctttgacctcctgtc 533
Query: 61 tggctccttattttctttatgtctgtgccatttacctgatgtacagctgacatttgcttt 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 532 tggctccttattttctttatgtctgtgccatttatctgatgtacagctgacatttgcttt 473
Query: 121 gcccattcctcccatcctaagcccagaactagtccttcactcagccagatctcatttcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gcccattcctcccatcctaagcccagaactagtccttcactcagccagatctcatttcct 413
Query: 181 tggtcaaccacccagaagaaaatccactgataagccattacacaaaatcccaaataaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 tggtcaaccacccagaagaaaatccactgataagccattacacaaaatcccaaataaata 353
Query: 241 gagaaagaataaaaaccctctggcagagcgctcagcacatctgctcaaaggatgctcatt 300
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 352 ----aagaataaaaaccctctggcagagcgctcagcacatctgctcaacggatgctcatt 297
Query: 301 ctatctgcctcttttccccaaagtggaacttggagccacccccgggacttaagagagaac 360
||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||
Sbjct: 296 ctatctgcctcttttccccaaaggggaatttggagccacccccgggacttacgagagaac 237
Query: 361 atttggaaaaggaataatagaaatgactcttaatgg 396
||||||||||||||||||||||||||||||||||||
Sbjct: 236 atttggaaaaggaataatagaaatgactcttaatgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 396
Length of database: 792
Length adjustment: 9
Effective length of query: 387
Effective length of database: 783
Effective search space: 303021
Effective search space used: 303021
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
