Query= MSMg01no395_h24.b1 MSMg01no395_h24.b1 CHROMAT_FILE:
MSMg01no395_h24.b1 PHD_FILE: MSMg01no395_h24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:22 2005
(428 letters)
>mm_chr12_118815901_118816728
Length = 828
Score = 801 bits (414), Expect = 0.0
Identities = 420/422 (99%)
Strand = Plus / Plus
Query: 5 gaattcttcctgtgctgcaagagcattaaggaatattattatccttcaagcagctgacct 64
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttcctgtgcaggaagagcattaaggaatattattatccttcaagcagctgacct 264
Query: 65 ggtaaaggacagagtgaatctcaaggggttttacaggtaacacaatttcttaacaccttg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggtaaaggacagagtgaatctcaaggggttttacaggtaacacaatttcttaacaccttg 324
Query: 125 tcaagaaaacagcctgtgttacaattgtaaccttgagcatagagtagcaggctgtctcgg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcaagaaaacagcctgtgttacaattgtaaccttgagcatagagtagcaggctgtctcgg 384
Query: 185 tattagctgtcagagggacagatgtgttttctctgctgaggatcctaagggtgcttgctt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tattagctgtcagagggacagatgtgttttctctgctgaggatcctaagggtgcttgctt 444
Query: 245 atggtcatgattaggcttctgggtctaaaagaatatgaaactccttcctaactacatagt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atggtcatgattaggcttctgggtctaaaagaatatgaaactccttcctaactacatagt 504
Query: 305 ctctctctctctctccctgtcccctgccgcctctcattctcctgagacatgggtgcatgc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctctctctctctctccctgtcccctgccgcctctcattctcctgagacatgggtgcatgc 564
Query: 365 tacactggggacttcaagaaaaataggtctctccatattggagacatggtcaagtctctg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tacactggggacttcaagaaaaataggtctctccatattggagacatggtcaagtctctg 624
Query: 425 ga 426
||
Sbjct: 625 ga 626
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space: 343161
Effective search space used: 343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no395_h24.g1 MSMg01no395_h24.g1 CHROMAT_FILE:
MSMg01no395_h24.g1 PHD_FILE: MSMg01no395_h24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:22 2005
(367 letters)
>mm_chr12_118867932_118868698
Length = 767
Score = 658 bits (340), Expect = 0.0
Identities = 363/377 (96%), Gaps = 10/377 (2%)
Strand = Plus / Minus
Query: 1 taagcaccagagggccaggacagaaagtctgctgccagaaagtgtcttcttccctggggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 taagcaccagagggccaggacagaaagtctgctgccagaaagtgtcttcttccctggggg 566
Query: 61 agggaagttgcccagcaaatctcaacaacatggttgcctaaacaaaacctaaaaaaggat 120
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 565 agggaagttacccagcaaatctcaacaacatggttgcctaaacaagacctaaaaaaggat 506
Query: 121 tcaggaattcttataagatttcagtcctcaaagagctatgggtaaataatgatactgaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 505 tcaggaattcttataagatttcagtcctcaaagagctatgggtaaataatggtactgaga 446
Query: 181 gagcagagagagggaggatcaagcacagggatagactagccaatcccaaggggcagacct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gagcagagagagggaggatcaagcacagggatagactagccaatcccaaggggcagacct 386
Query: 241 agccagcaacaccaggtgatgtcagcaggctgtgcttataaacttcattcatacaaacat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agccagcaacaccaggtgatgtcagcaggctgtgcttataaacttcattcatacaaacat 326
Query: 301 acaaaagtgtga----------tgtgtgtgtgtgtgtgtgtgtgtgtgtganataaaatt 350
|||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 325 acaaaagtgtgatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagataaaatt 266
Query: 351 ataattatattataaga 367
|||||||||||||||||
Sbjct: 265 ataattatattataaga 249
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 767
Length adjustment: 9
Effective length of query: 358
Effective length of database: 758
Effective search space: 271364
Effective search space used: 271364
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
