Query= MSMg01no395_k01.b1 MSMg01no395_k01.b1 CHROMAT_FILE:
MSMg01no395_k01.b1 PHD_FILE: MSMg01no395_k01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:32 2005
(315 letters)
>mm_chr12_110983822_110984536
Length = 715
Score = 445 bits (230), Expect = e-129
Identities = 277/304 (91%), Gaps = 24/304 (7%)
Strand = Plus / Minus
Query: 4 ggaattcctgcttttcct--tcaccaccttcctggggattaacctaatatggtttctgcc 61
||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggaattcctgc--ttcatgctcaccaccttcctggggattaacctaatatggtttctgcc 311
Query: 62 tttggggactctattagtcaatcagcacactccattattctgtcactatagacctggcct 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tttggggactctattagtcaatcagcacactccattattctgtcactatagacctggcct 251
Query: 122 ggatcctaaggcttagaatacagcagaagataagtccgggaagtaag------------- 168
|||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 250 ggatcctaaggcttagaatacagcagaagataagtcagggaagtaagatgggagggaggg 191
Query: 169 ---gggtagggagtaaaacagaggaaagagaaaagatgcaaaggaaaggtcctcgtctgc 225
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 190 aaggggtagggagtaaaacagaggaaagagaaaagacgcaaaggaaaggtcctcgtctgc 131
Query: 226 cttgggaaatcttaaagcttttttcttttcttttcttttctttt-tttt-tttt-tttt- 281
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||
Sbjct: 130 cttgggaaatcttaaagcttttttcttttcttttcttttcttttcttttcttttcttttc 71
Query: 282 tttt 285
||||
Sbjct: 70 tttt 67
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no395_k01.g1 MSMg01no395_k01.g1 CHROMAT_FILE:
MSMg01no395_k01.g1 PHD_FILE: MSMg01no395_k01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:32 2005
(376 letters)
>mm_chr12_110826908_110827683
Length = 776
Score = 704 bits (364), Expect = 0.0
Identities = 373/376 (99%)
Strand = Plus / Plus
Query: 1 tgggtaccctccttctgccccatgaaacccttggtccatttcccacaggagcccaaagtt 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 tgggtaccctccttctgccccatgaaacccttggtccatttcccagaggagcccaaagtt 260
Query: 61 ttgagagtgaattgacttccctccctttaggagaagacaggaggcctgttgctccatgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgagagtgaattgacttccctccctttaggagaagacaggaggcctgttgctccatgtc 320
Query: 121 ttcatgagctgtttctggagagtcaagccctcctatccctgcccctcccacccttgccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcatgagctgtttctggagagtcaagccctcctatccctgcccctcccacccttgccct 380
Query: 181 tgcccatcccaaccctctcttcacactccatcctttctgaccccatgctccatgttctcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcccatcccaaccctctcttcacactccatcctttctgaccccatgctccatgttctcc 440
Query: 241 agtcctgcctcctactatccaccctctcccttttagaacaaaccacaaagtcagataatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtcctgcctcctactatccaccctctcccttttagaacaaaccacaaagtcagataatc 500
Query: 301 ttttcttctctttattcatggggcaaaagcaggtatgagttgggaaagcaatggatggac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 501 ttttcttctctttattcatggggcaaaagcaggtatgagttgggaaagcaatggaaggac 560
Query: 361 ctctcctccctgtggc 376
||||||| ||||||||
Sbjct: 561 ctctccttcctgtggc 576
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 776
Length adjustment: 9
Effective length of query: 367
Effective length of database: 767
Effective search space: 281489
Effective search space used: 281489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
