Query= MSMg01no396_b24.b1 MSMg01no396_b24.b1 CHROMAT_FILE:
MSMg01no396_b24.b1 PHD_FILE: MSMg01no396_b24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:11 2005
(230 letters)
>mm_chr12_8095325_8095954
Length = 630
Score = 422 bits (218), Expect = e-122
Identities = 224/226 (99%)
Strand = Plus / Minus
Query: 5 gaattcctgctgtattatctattctttatgctcccccacccccaaataaatatctatctc 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gaattcctgctgtaatatctattctttatgctcccccacccccaaataaatatctatctc 340
Query: 65 atcattcctggagaacctccattggctattggattcctttgtgggaaaataactagccct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 atcattcctggagaacctccattggctattggattcctttgtgggaaaataactagccct 280
Query: 125 actcagcaagaaaatcaattctcctggagaagttagaggagtatagctgctatcaggata 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 actcagcaagaaaatcaattctcctggagaagttagaggagtatagctgctatcaggata 220
Query: 185 cacttaactgagtaatgtgtgtgtgtgtgtgtgtgtatgtgtgtgt 230
|||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 219 cacttaactgagtaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 174
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 230
Length of database: 630
Length adjustment: 9
Effective length of query: 221
Effective length of database: 621
Effective search space: 137241
Effective search space used: 137241
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no396_b24.g1 MSMg01no396_b24.g1 CHROMAT_FILE:
MSMg01no396_b24.g1 PHD_FILE: MSMg01no396_b24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:11 2005
(386 letters)
>mm_chr12_7933385_7934170
Length = 786
Score = 692 bits (358), Expect = 0.0
Identities = 386/410 (94%), Gaps = 24/410 (5%)
Strand = Plus / Plus
Query: 1 cattacaaactttcaatttacttcttagaaaagcacatttactcaaaataatgaaaattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 cattacaaactttcaatttacttcttagaaaagcacatttactcaaaataatgaaaattg 236
Query: 61 catgtgcccatgttaggtgcctcgaaactgcctgcaattccatctccagggggattttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 catgtgcccatgttaggtgcctcgaaactgcctgcaattccatctccagggggattttct 296
Query: 121 acaggcagctgcactcacttatgtttatat--------acatacacacacacacacacac 172
|||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 297 acaggcagctgcactcacttatgtttatatacatacacacatacacacacacacacacac 356
Query: 173 acacacacacacacacacaca----------------tgattaaaggaaataaaaataaa 216
||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 357 acacacacacacacacacacacacacatacacacacatgattaaaggaaataaaaataaa 416
Query: 217 cttctaataaacaatatctgtgtcaagtccagaagctacaagcatttttaaacattattt 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 cttctaataaacaatatctgtgtcaagtccagaagctacaagcatttttaaacattattt 476
Query: 277 ggaagaaggaattaataatattaagaccttaaaataggacaggcttagtggtcacccaag 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ggaagaaggaattaataatattaagaccttaaaataggacaggcttagtggtcacccaag 536
Query: 337 gctggtggatgaggatttctggtgagaaagtaagttcctgcaggttctct 386
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 gctggtggatgaggatttctggtgagaaagtaagttcctgcaggttctct 586
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 14
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 386
Length of database: 786
Length adjustment: 9
Effective length of query: 377
Effective length of database: 777
Effective search space: 292929
Effective search space used: 292929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
