Query= MSMg01no397_n13.b1 MSMg01no397_n13.b1 CHROMAT_FILE:
MSMg01no397_n13.b1 PHD_FILE: MSMg01no397_n13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:10:24 2005
(237 letters)
>mm_chr12_33605385_33606022
Length = 638
Score = 383 bits (198), Expect = e-111
Identities = 228/238 (95%), Gaps = 1/238 (0%)
Strand = Plus / Plus
Query: 1 cattttgttctgtaagaaggcactagttgtttgttcccacttgtgagcgtttgcctcacc 60
||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 201 cattttgttctgtaagaaggcactagttgtttgttcccacttgggagtgtttgcctcacc 260
Query: 61 ttggtcccaccggcaggtcctttgcagggaaggtacgactcacttgctttttaaagaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 ttggtcccaccggcaggtcctttgcagggaaggtacgactcacttgctttttaaagaagc 320
Query: 121 cagg-ttagggtcagacccttggaacacagaaccgagcagaacagatgccagacttctta 179
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 321 caggcttagggtcagacccttgaaacacagaaccgagcagaacagatgccagacttcaga 380
Query: 180 tttcctgttcaaaccagaaaccttgtcacactggtgctctaagcacgtagaaagtctt 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaacctgttcaaaccagaaaccttgtcacactggtgctctaagcacgtagaaagtctt 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 638
Length adjustment: 9
Effective length of query: 228
Effective length of database: 629
Effective search space: 143412
Effective search space used: 143412
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no397_n13.g1 MSMg01no397_n13.g1 CHROMAT_FILE:
MSMg01no397_n13.g1 PHD_FILE: MSMg01no397_n13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:10:24 2005
(177 letters)
>mm_chr12_33768865_33769440
Length = 576
Score = 311 bits (161), Expect = 1e-89
Identities = 173/177 (97%), Gaps = 1/177 (0%)
Strand = Plus / Minus
Query: 1 tctatttgcttcctgtagggtgttcaaactagttcccgagggtgatgtggcacgaaagga 60
||||||||||||||||| ||||||||| |||||||||||||||||||||| | |||||||
Sbjct: 376 tctatttgcttcctgta-ggtgttcaagctagttcccgagggtgatgtgggaggaaagga 318
Query: 61 ccatctaactggggacacagaggaggacttgagcctgagaggaagctggtgtataaataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ccatctaactggggacacagaggaggacttgagcctgagaggaagctggtgtataaataa 258
Query: 121 ggaggcactgagtgtctctacaggagcctggtcaggtggctgtgtacacctcaggca 177
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ggaggcactgagtgtctctacaggagcctggtcaggtggctgtgtacacctcaggca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 177
Length of database: 576
Length adjustment: 8
Effective length of query: 169
Effective length of database: 568
Effective search space: 95992
Effective search space used: 95992
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
