NNNTTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCCCTTCGATTGCTGCTCAAAGGAAAACCCTTAACTTATAGAAA
CACGGGAATGGAAAACATATATGTATCCAACCCTAACACCAAGTTATCAC
AGAGGACCTTGACATTTGTGGTGCATTCAGAGTAATTTAATTAGGAACAG
CAGCCTCAATCACAGCACAACTGACTAGGGTAACTCTGCCTTCCCACCTA
CTTGCCTCTCTATTCAAGACATATCCAATGTAAGCAGAAGCCCCCTCCAG
CTTTTTCGTCTTATATTTACATAAAGAATTCCTCATCTCATCTGTAACAC
AAAACATTCATCCCATGATGAACTCTAATGCATACATAGCATATCTGGCT
GTCAATCAAAAGGCAAAAGGAACATAACTATAAAGAGACAAAGCAATCAG
AATGAGAGTTATATGTGACAACGATTCTGGAACCAGCAAGCAACAAGTTA
AACATAACCATGACCAGGGTACTAATGTAAAAAGTGACCAACAGAGCTGG
GATCAGCAGGTAAGTAAAGCATGCAGACTTGCCTTTGGATCCCCAGCGCA
CACATGGAATTAACCACATCTACAATCCCAGCTCTTGTAGACTAGAAGCT
GCTTCTTTCCTGAGCTCACTAGCTATATAATCTAAGCCTAATCACCTGAT
GAAGTCCCCAAAAAAAACCCCCCCCCTCCAAATTTAGGTGGAGGAAAAAT
CTAACCCCCCAATTTGACCTCTG

NNNNCCGATGATAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTTCTTTATGTCCTCTACCA
TCATCATGAGATATGCTTTTAAATCCAGGTCTACCTTTTCAGGTGTGTTA
GGGTGTCCTGGATTGGGCGAAGTGGGCGTTCTGGGTTCTGATGATGGTGA
GTGGTCCTGGCTTCTGTTAGTAGGATTCTTACGTTTACCTTTCGCCATCT
GGCAATCTCTGGAGTTAGTTGTTATAGTTGTCTTTGTTAAAAGATTGTTC
CTCTGTTGATTTTGTTACCCTCTATCTTCAGGCGTGGGAGACAAGCTCTC
TTCTCTGAGTTTCAGTGGTCAGAGCAGTCTCTGTAGGCAAGCTCTCCTCT
CTCAGGGAAGGTGTACAGTTATCTGGTGTTTGGACCTCCTCCTGGCTGAA
GGTGAAGGCCCAAAACAGGATCTTTCCCAGAAGCTGTGTTGCTTTGGCCA
GGAAGGTGGCCAGTTGTCTGGAGTCGAAGATGTCGCAGCCTCAGAAGCTC
TGTGGCTCTTGCCGGGAAAGTGGCTTGTTTGTCTGGAGCTGAAGATGGTG
CCCCCCCCAAATCTCTGGGATTTTTTCGCTCGTCCCAGAAAAGTTGTCAC
TCTGTATTTCCCCCGGTCCCCCTGGAGCCTGTCCTCCGCGGAATCCCGGA
ACCTAAAGGTTTTGGTCGGGCCTGGGCCCAAACCCTTCAGCTGGTGTAAA
CCCCGCTTTCCCTG

Query= MSMg01no398_o23.b1 MSMg01no398_o23.b1 CHROMAT_FILE:
MSMg01no398_o23.b1 PHD_FILE: MSMg01no398_o23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:11:49 2005
         (526 letters)



>mm_chr12_99075986_99076911
          Length = 926

 Score =  986 bits (510), Expect = 0.0
 Identities = 519/522 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcccttcgattgctgctcaaaggaaaacccttaacttatagaaacacgggaatgga 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcccttcgattgctgctcaaaggaaaacccttaacttatagaaacacgggaatgga 264

                                                                       
Query: 65  aaacatatatgtatccaaccctaacaccaagttatcacagaggaccttgacatttgtggt 124
           ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 265 aaacatatatgtatccaaccctaacaccaagatatcacagaggaccttggcatttgtggt 324

                                                                       
Query: 125 gcattcagagtaatttaattaggaacagcagcctcaatcacagcacaactgactagggta 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gcattcagagtaatttaattaggaacagcagcctcaatcacagcacaactgactagggta 384

                                                                       
Query: 185 actctgccttcccacctacttgcctctctattcaagacatatccaatgtaagcagaagcc 244
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 385 actctgccttcccacctacttgcctctctattcaagacatatccaatgtacgcagaagcc 444

                                                                       
Query: 245 ccctccagctttttcgtcttatatttacataaagaattcctcatctcatctgtaacacaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ccctccagctttttcgtcttatatttacataaagaattcctcatctcatctgtaacacaa 504

                                                                       
Query: 305 aacattcatcccatgatgaactctaatgcatacatagcatatctggctgtcaatcaaaag 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aacattcatcccatgatgaactctaatgcatacatagcatatctggctgtcaatcaaaag 564

                                                                       
Query: 365 gcaaaaggaacataactataaagagacaaagcaatcagaatgagagttatatgtgacaac 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gcaaaaggaacataactataaagagacaaagcaatcagaatgagagttatatgtgacaac 624

                                                                       
Query: 425 gattctggaaccagcaagcaacaagttaaacataaccatgaccagggtactaatgtaaaa 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gattctggaaccagcaagcaacaagttaaacataaccatgaccagggtactaatgtaaaa 684

                                                     
Query: 485 agtgaccaacagagctgggatcagcaggtaagtaaagcatgc 526
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agtgaccaacagagctgggatcagcaggtaagtaaagcatgc 726


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 926
Length adjustment: 10
Effective length of query: 516
Effective length of database: 916
Effective search space:   472656
Effective search space used:   472656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)