Query= MSMg01no399_g16.b1 MSMg01no399_g16.b1 CHROMAT_FILE:
MSMg01no399_g16.b1 PHD_FILE: MSMg01no399_g16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:25 2005
(421 letters)
>mm_chr12_77655059_77655876
Length = 818
Score = 743 bits (384), Expect = 0.0
Identities = 408/418 (97%), Gaps = 5/418 (1%)
Strand = Plus / Minus
Query: 5 gaattcatccagccccttcgccagcagctgtcc-ttcctcagagacagtccagcctccat 63
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 618 gaattcatccagccccttcgccagcagctgtcctttcctcagagacagtccagcctccat 559
Query: 64 ccactggccttcttggcctcccatcccaacctctggagatcagagcagccaaaggacctt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ccactggccttcttggcctcccatcccaacctctggagatcagagcagccaaaggacctt 499
Query: 124 tgaccttccccagagcaatccccaactctactttcagaccctccctagagagagcagaag 183
||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||
Sbjct: 498 tgaccttccccagagcaatcctcaactctactttcagaacctccctagagagggcagaag 439
Query: 184 gaaacactagagaacagctacaacttttccactgaaacaggtggaggagcaatgtgaact 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gaaacactagagaacagctacaacttttccactgaaacaggtggaggagcaatgtgaact 379
Query: 244 tccttagagatctcaagcgagatacacaaaccactgggctgtgctctccccacaagtcgc 303
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 378 tccttagagatctcaagcgagatacacaaaccactgggctgtgctctccccacaagtcac 319
Query: 304 ccccccccacacacacacacatcatacttacttcctaagtgttcccagaagccccactct 363
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ccccccccacacacaca----tcatacttacttcctaagtgttcccagaagccccactct 263
Query: 364 tgccaatgtgttcttaaagctacacattcccttctgaggttctgggggatggcggggg 421
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 262 tgccaatgtgttcttaaagctacacattcccttctgaggttctgggggatggtggggg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 818
Length adjustment: 9
Effective length of query: 412
Effective length of database: 809
Effective search space: 333308
Effective search space used: 333308
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no399_g16.g1 MSMg01no399_g16.g1 CHROMAT_FILE:
MSMg01no399_g16.g1 PHD_FILE: MSMg01no399_g16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:26 2005
(394 letters)
>mm_chr12_77637479_77638272
Length = 794
Score = 739 bits (382), Expect = 0.0
Identities = 391/394 (99%)
Strand = Plus / Plus
Query: 1 tttctccagaggcggcaggggatagatatgtcctgccaagtgctagccaggactctgggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttctccagaggcggcaggggatagatatgtcctgccaagtgctagccaggactctgggt 260
Query: 61 gagaggcatttttgaagtattgggaaggagcagggaattcaaaaggagggccgctagaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagaggcatttttgaagtattgggaaggagcagggaattcaaaaggagggccgctagaag 320
Query: 121 gcttctgtctgtctggtagtgagtgagcctctccatgctaccctggattgtagctggttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcttctgtctgtctggtagtgagtgagcctctccatgctaccctggattgtagctggttg 380
Query: 181 aggattcaggactcccagatgtgtgctggccactgtccctcagatagacagggtgaccta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggattcaggactcccagatgtgtgctggccactgtccctcagatagacagggtgaccta 440
Query: 241 gggcagccctggcctgcctggctttggaattcccctgcttccagtcagttggtgaatcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggcagccctggcctgcctggctttggaattcccctgcttccagtcagttggtgaatcac 500
Query: 301 acctgtgtctagtctctttgcttggcctcaccgttctgaagctgcccacccctcttcacc 360
|||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 501 acctgtgtctagcctctttgcttggcctcactgttctgaagctgtccacccctcttcacc 560
Query: 361 ttcatcctccgagtgaatttggtttactaggtgg 394
||||||||||||||||||||||||||||||||||
Sbjct: 561 ttcatcctccgagtgaatttggtttactaggtgg 594
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 394
Length of database: 794
Length adjustment: 9
Effective length of query: 385
Effective length of database: 785
Effective search space: 302225
Effective search space used: 302225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
