Query= MSMg01no401_f11.b1 MSMg01no401_f11.b1 CHROMAT_FILE:
MSMg01no401_f11.b1 PHD_FILE: MSMg01no401_f11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:56 2005
(321 letters)
>mm_chr12_61893924_61894647
Length = 724
Score = 588 bits (304), Expect = e-172
Identities = 318/324 (98%), Gaps = 3/324 (0%)
Strand = Plus / Plus
Query: 1 taggccttgcttttatctcatagatgagatgacaatattgaacaagtagagccatttttg 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taggccttgcttttatttcatagatgagatgacaatattgaacaagtagagccatttttg 260
Query: 61 gtcaggtcataaaacaattggcttactattagtctgtcttagaatctacactaaactata 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcaggtcgtaaaacaattggcttactattagtctgtcttagaatctacactaaactata 320
Query: 121 tgtagtttttaaaatcaatcatatatctatattttggttttctctacatttgttgtgatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtagtttttaaaatcaatcatatatctatattttggttttctctacatttgttgtgatt 380
Query: 181 aatatattttctatgatgtaatattcttctgaatgggctgaggatacagtgggtaaagta 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatatattttctgtgatgtaatattcttctgaatgggctgaggatacagtgggtaaagta 440
Query: 241 tatgctatgcgggcatgacgacctgaattgtatccaagaacctattgttgttgttgttgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatgctatgcgggcatgacgacctgaattgtatccaagaacctattgttgttgttgttgt 500
Query: 301 t---aaatctgaatgaacatggtg 321
| ||||||||||||||||||||
Sbjct: 501 tgttaaatctgaatgaacatggtg 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 724
Length adjustment: 9
Effective length of query: 312
Effective length of database: 715
Effective search space: 223080
Effective search space used: 223080
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no401_f11.g1 MSMg01no401_f11.g1 CHROMAT_FILE:
MSMg01no401_f11.g1 PHD_FILE: MSMg01no401_f11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:56 2005
(577 letters)
>mm_chr12_61925821_61926797
Length = 977
Score = 698 bits (361), Expect = 0.0
Identities = 377/383 (98%), Gaps = 2/383 (0%)
Strand = Plus / Minus
Query: 195 ggtctgagttacctcattccttcaccaaatcaacagttaatgaaaatgtgctatctatac 254
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 977 ggtctgagttacctcattccttcaccaaatcaacagttaatgaaaatgtgctacctatac 918
Query: 255 acaatgtaattcaattttgctgtaaacaaaactaaaaccatgagatttgtaggtaaaggg 314
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 917 acaatgtaattcaattttgctgtaaacaaaactgaaaccatgagatttgtaggtaaaggg 858
Query: 315 acagaaaatactacactgagtggagtaacacagtcacagagagacaaatgccaaatgctc 374
||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 857 acagaaaatactacactgagtagagta--acagtcacagagagacaaatgccaaatgctc 800
Query: 375 tttcttatttgtggacttacagattattttatttagccattaaattataatttccagcat 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 tttcttatttgtggacttacagattattttatttagccattaaattataatttccagcat 740
Query: 435 ctaaaattaccagcatatgaattattaacagataatttaaaagtttaccgaatcatgaga 494
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 ctaaaattaccagtatatgaattattaacagataatttaaaagtttaccgaatcatgaga 680
Query: 495 gaaccatgaagtggttagtcatacagttaagaagatggttgtaagttgtaatagtagttc 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gaaccatgaagtggttagtcatacagttaagaagatggttgtaagttgtaatagtagttc 620
Query: 555 aaaatcaaaagtatgagacagaa 577
|||||||||||||||||||||||
Sbjct: 619 aaaatcaaaagtatgagacagaa 597
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 977
Length adjustment: 10
Effective length of query: 567
Effective length of database: 967
Effective search space: 548289
Effective search space used: 548289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
