Query= MSMg01no401_g13.b1 MSMg01no401_g13.b1 CHROMAT_FILE:
MSMg01no401_g13.b1 PHD_FILE: MSMg01no401_g13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:01 2005
(498 letters)
>mm_chr12_78214332_78215229
Length = 898
Score = 799 bits (413), Expect = 0.0
Identities = 440/449 (97%)
Strand = Plus / Minus
Query: 50 agcagtaagctggcaggcttactgacagcagcagctgagaacttaacgtgttgagacaag 109
|||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 896 agcagtaagcaggcaggcttactgacagcagcagccgagaacttaacgtgttgagacaag 837
Query: 110 gcagaaagggaactaactgggaatggcctaggcttttgaaacctcaaagcctgcccctag 169
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 gcagaaagggagctagctgggaatggcctaggcttttgaaacctcaaagcctgcccctag 777
Query: 170 taacacacctgctccaataaggccacacctcttaatccttcccaaacaattctaccagct 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 taacacacctgctccaataaggccacacctcttaatccttcccaaacaattctaccagct 717
Query: 230 gtggaccatttattaaattgtatgagcctgtctgggtcatacattaaaatcaccatgttt 289
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 716 gtggaccaagcattaaattgtatgagcctgtctgggtcatacattaaaatcaccacgttt 657
Query: 290 agtaaccttgtggccttgaattagttcactcccctaagatagaatctcccaagtggtagg 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 agtaaccttgtggccttgaattagttcactcccctaagatagaatctcccaagtggtagg 597
Query: 350 aagtgaatggctctgaacaacccaaacaactcagtgctcagagtggctgggcaaggctca 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 aagtgaatggctctgaacaacccaaacaactcagtgctcagagtggctgggcaaggctca 537
Query: 410 gagcagcaagaatcctggcagcctcatacttttcttgacttattatatacatgtgtgttt 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 gagcagcaagaatcctggcagcctcatacttttcttgacttattatatacatgtgtgttt 477
Query: 470 gtgtttgtgtgggtgtgtgtatgtatgta 498
|||||||||||||||| ||||||||||||
Sbjct: 476 gtgtttgtgtgggtgtatgtatgtatgta 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space: 433344
Effective search space used: 433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no401_g13.g1 MSMg01no401_g13.g1 CHROMAT_FILE:
MSMg01no401_g13.g1 PHD_FILE: MSMg01no401_g13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:02 2005
(270 letters)
>mm_chr12_78044905_78045575
Length = 671
Score = 485 bits (251), Expect = e-142
Identities = 266/271 (98%), Gaps = 1/271 (0%)
Strand = Plus / Plus
Query: 1 tcttaacagacgttagttaccttgtaggcaatagtcagaatttgacctaagtctcaggta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttaacagacgttagttaccttgtaggcaatagtcagaatttgacctaagtctcaggta 260
Query: 61 ctctcttattttaggaacagaggcagttgcagcactagttttaaaaggtcaagagaactt 120
||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 261 ctctcttgttttaggaacagaggcagttgtagcactaattttaaaaggtcaagagaactt 320
Query: 121 tttcagagacagagttaccatggagagaaaaaccaaagatgaggacaggccttggggaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttcagagacagagttaccatggagagaaaaaccaaagatgaggacaggccttggggaga 380
Query: 181 accactgatctgcct-caaggataactccagtgaaggtggtttcctcaaagtagagtcag 239
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accactgatctgccttcaaggataactccagtgaaggtggtttcctcaaagtagagtcaa 440
Query: 240 ggcccaatggtgagccacttccacacaggca 270
|||||||||||||||||||||||||||||||
Sbjct: 441 ggcccaatggtgagccacttccacacaggca 471
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 270
Length of database: 671
Length adjustment: 9
Effective length of query: 261
Effective length of database: 662
Effective search space: 172782
Effective search space used: 172782
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
